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Job DescriptionP29018
Confidence99.72%DateThu Jan 5 11:45:34 GMT 2012
Rank64Aligned Residues270
% Identity14%Templated1pf4a2
SCOP infoABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region
Resolution3.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  RWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHA
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Template Sequence  KRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNA. ESNFLRILPFMILGLMFVRGLSGFASSYCLSWV
Template Known Secondary structure  TTS
SSTTSS
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TTT
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   14.....20.........30.........40.........50......... 60.........70.........80.........90..
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  GQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILL
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Template Conservation         

       
            
        
   
                  
            
    
Template Sequence  SGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLI
Template Known Secondary structure  GGGTTT
SSTT



GGGTTGGGGGGS


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TG
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  GTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSS
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Template Conservation                                 ...................................              
Template Sequence  VVAPVVAFAISFVSKRFRKISRNMQTAMGHR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QQTMKLVSAQSIAD
Template Known Secondary structure  GGTTGGGGTT


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GGGG
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   173......180.........190.........200... ......210.......
 
   251........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  GILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSL
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Template Conservation                   
   
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Template Sequence  PVIQMIASLALFAVLFLASVDS. . . . . . . . IRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTL
Template Known Secondary structure  TTGGGGTSS........




GGGGGGTTTTTGGGGGSST




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   253......260.........270.... .....280.........290.........300.........310........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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