Return to main results Retrieve Phyre Job Id

Job DescriptionP29018
Confidence100.00%DateThu Jan 5 11:45:34 GMT 2012
Rank15Aligned Residues240
% Identity34%Templated1pf4a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   330.........340.........350.........360 .........370.........380.........390.........400.. .....
Predicted Secondary structure 




















.




























.


Query SS confidence 






























.









































.




Query Sequence  TPLAHPQRGEAELASTDPVTIEAEELFITSP. EGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSY. QGSLR
Query Conservation                      
   


  
 .    

  
 
 
  
    
 
 







   
 
    . 
 
 
Alig confidence 






























.









































.




Template Conservation       
              
   


         

  


 
  

   
 
 








  
 
      
 
 
Template Sequence  MDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSIC
Template Known Secondary structure 







S








SS
SS

TT





TT






S
SSTSSSS

SSS
Template Predicted Secondary structure 







































Template SS confidence 















































































   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   408.410.........420.........430.........440...... ...450.........460.........470.........480......
Predicted Secondary structure 




















.
















Query SS confidence 






































.







































Query Sequence  INGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLA. RPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARL
Query Conservation                   
  
 
   

  

 


  
.                 
   
  
  

 
 
   
  
Alig confidence 






































.







































Template Conservation    
              
  
 
   
   

 


                                
          
Template Sequence  LDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSL
Template Known Secondary structure 







SSTTS


B


S



SS
TTTSS



GGGGGGSS

SS
Template Predicted Secondary structure 




































Template SS confidence 















































































   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   487..490.........500.........510.........520.........530.........540.........550.........560......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  SVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
Query Conservation 







 




     





 

 

      
   
       


 


        
 
  
  
 
   

Alig confidence 















































































Template Conservation 
 
  


 




   
 







 


      
   
       


 


        
 
  
  
 

  
 
Template Sequence  SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGR
Template Known Secondary structure 
TTTTB
S
S



S


TT
SS





S


GGGG



SS
SSS
Template Predicted Secondary structure 




















Template SS confidence 















































































   482.......490.........500.........510.........520.........530.........540.........550.........560.
 
   567..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  YAE
Query Conservation     
Alig confidence 


Template Conservation    
Template Sequence  HAD
Template Known Secondary structure 


Template Predicted Secondary structure 


Template SS confidence 


   562..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions