Job Description P29018 Confidence 100.00% Date Thu Jan 5 11:45:34 GMT 2012 Rank 20 Aligned Residues 234 % Identity 26% Template c3gfoA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq. Resolution 2.30 Å

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		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.			.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																																									.														.	.
Query SS confidence																																																									.														.	.
Query Sequence		D	P	V	T	I	E	A	E	E	L	F	I	T	S	P	E	G	K	T	L	A	G	P	L	N	F	T	L	P	A	G	Q	R	A	V	L	V	G	R	S	G	S	G	K	S	S	L	L	N	A	L	S	G	F	L	.	S	Y	Q	G	S	L	R	I	N	G	I	E	L	.	.	R	D	L	S	P	E	S	W	R
Query Conservation																																																									.														.	.
Alig confidence																																																									.														.	.
Template Conservation
Template Sequence		E	D	Y	I	L	K	V	E	E	L	N	Y	N	Y	S	D	G	T	H	A	L	K	G	I	N	M	N	I	K	R	G	E	V	T	A	I	L	G	G	N	G	V	G	K	S	T	L	F	Q	N	F	N	G	I	L	K	P	S	S	G	R	I	L	F	D	N	K	P	I	D	Y	S	R	K	G	I	M	K	L	R
Template Known Secondary structure																T	T	S													T	T	S								T	T	S	S									T	T	S	S			S							T	T						S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		423	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.															.	.
Query SS confidence												.	.															.	.
Query Sequence		K	H	L	S	W	V	G	Q	N	P	.	.	Q	L	P	A	A	T	L	R	D	N	V	L	L	A	.	.	R	P	D	A	S	E	Q	E	L	Q	A	A	L	D	N	A	W	V	S	E	F	L	P	L	L	P	Q	G	V	D	T	P	V	G	D	Q	A	A	R	L	S	V	G	Q	A	Q	R	V	A	V	A	R
Query Conservation												.	.															.	.
Alig confidence												.	.															.	.															.	.	.	.	.							.	.
Template Conservation																																												.	.	.	.	.							.	.
Template Sequence		E	S	I	G	I	V	F	Q	D	P	D	N	Q	L	F	S	A	S	V	Y	Q	D	V	S	F	G	A	V	N	M	K	L	P	E	D	E	I	R	K	R	V	D	.	.	.	.	.	N	A	L	K	R	T	.	.	G	I	E	H	L	K	D	K	P	T	H	C	L	S	F	G	Q	K	K	R	V	A	I	A	G
Template Known Secondary structure			S						S	S	G	G	G	T			S	S	B											T	S													.	.	.	.	.						T	.	.	T		G	G	G	T	T	S	B	G	G	G	S
Template Predicted Secondary structure																																												.	.	.	.	.							.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.			.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure																																				.	.																	.
Query SS confidence																																				.	.																	.
Query Sequence		A	L	L	N	P	C	S	L	L	L	L	D	E	P	A	A	S	L	D	A	H	S	E	Q	R	V	M	E	A	L	N	A	A	S	.	.	L	R	Q	T	T	L	M	V	T	H	Q	L	E	D	L	A	.	D	W	D	V	I	W	V	M	Q	D	G	R	I	I	E	Q	G	R	Y	A	E	L	S	V	A	G	G
Query Conservation																																				.	.																	.
Alig confidence																																				.	.																	.
Template Conservation
Template Sequence		V	L	V	M	E	P	K	V	L	I	L	D	E	P	T	A	G	L	D	P	M	G	V	S	E	I	M	K	L	L	V	E	M	Q	K	E	L	G	I	T	I	I	I	A	T	H	D	I	D	I	V	P	L	Y	C	D	N	V	F	V	M	K	E	G	R	V	I	L	Q	G	N	P	K	E	V	F	A	E	K	E
Template Known Secondary structure				T	T			S							T	T	T	T																													S			S	S	G	G	G	G		S							T	T												T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		576	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	A	T	L	L	A	H	R	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	R	K	V	N	L	R	L	P	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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