Job Description P29018 Confidence 100.00% Date Thu Jan 5 11:45:34 GMT 2012 Rank 45 Aligned Residues 209 % Identity 29% Template c3d31B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		I	E	A	E	E	L	F	I	T	S	P	E	G	K	T	L	A	G	P	L	N	F	T	L	P	A	G	Q	R	A	V	L	V	G	R	S	G	S	G	K	S	S	L	L	N	A	L	S	G	F	L	S	Y	Q	.	G	S	L	R	I	N	G	I	E	L	R	D	L	S	P	E	S	W	R	K	H	L	S	W	V
Query Conservation																																																								.
Alig confidence												.	.																																											.																		.	.
Template Conservation												.	.																																																													.	.
Template Sequence		I	E	I	E	S	L	S	R	K	W	.	.	K	N	F	S	L	D	N	L	S	L	K	V	E	S	G	E	Y	F	V	I	L	G	P	T	G	A	G	K	T	L	F	L	E	L	I	A	G	F	H	V	P	D	S	G	R	I	L	L	D	G	K	D	V	T	D	L	S	P	E	K	.	.	H	D	I	A	F	V
Template Known Secondary structure												.	.	S	S												T	T										T												T	S	S			S							T	T				T	T	S					.	.		T
Template Predicted Secondary structure												.	.																																																													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.
		429	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.				.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure											.										.	.	.
Query SS confidence											.										.	.	.
Query Sequence		G	Q	N	P	Q	L	P	A	A	.	T	L	R	D	N	V	L	L	A	.	.	.	R	P	D	A	S	E	Q	E	L	Q	A	A	L	D	N	A	W	V	S	E	F	L	P	L	L	P	Q	G	V	D	T	P	V	G	D	Q	A	A	R	L	S	V	G	Q	A	Q	R	V	A	V	A	R	A	L	L	N	P	C
Query Conservation											.										.	.	.
Alig confidence											.										.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	N	Y	S	L	F	P	H	M	N	V	K	K	N	L	E	F	G	M	R	M	K	K	I	K	D	P	K	R	V	L	D	T	A	R	D	L	K	I	E	H	L	L	D	R	N	P	L	.	.	.	.	.	.	.	.	.	.	.	T	L	S	G	G	E	Q	Q	R	V	A	L	A	R	A	L	V	T	N	P
Template Known Secondary structure			T	T					T	T	S																												T	T		T	T	T	T	T	S		G	G	.	.	.	.	.	.	.	.	.	.	.	G	S														T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.												.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.			.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure																													.	.																		.
Query SS confidence																													.	.																		.
Query Sequence		S	L	L	L	L	D	E	P	A	A	S	L	D	A	H	S	E	Q	R	V	M	E	A	L	N	A	A	.	.	S	L	R	Q	T	T	L	M	V	T	H	Q	L	E	D	L	A	.	D	W	D	V	I	W	V	M	Q	D	G	R	I	I	E	Q	G	R	Y	A	E	L	S	V	A
Query Conservation																													.	.																		.
Alig confidence																													.	.																		.
Template Conservation
Template Sequence		K	I	L	L	L	D	E	P	L	S	A	L	D	P	R	T	Q	E	N	A	R	E	M	L	S	V	L	H	K	K	N	K	L	T	V	L	H	I	T	H	D	Q	T	E	A	R	I	M	A	D	R	I	A	V	V	M	D	G	K	L	I	Q	V	G	K	P	E	E	I	F	E	K
Template Known Secondary structure		S						S	S	S	T	T	S																			T	T								S										S						S	S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions