Job Description P29018 Confidence 96.93% Date Thu Jan 5 11:45:34 GMT 2012 Rank 110 Aligned Residues 170 % Identity 12% Template c3bh0A_ PDB info PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p Resolution 2.35 Å

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	G	Q	R	A	V	L	V	G	R	S	G	S	G	K	S	S	L	L	N	A	L	S	G	F	L	S	Y	Q	G	S	L	R	I	N	G	I	E	L	R	D	L	S	P	E	S	W	R	K	H	L	S	W	V	G	Q	N	P	Q	L	P	A	A	T	L	R	D	N	V	L	L	A	R	P	D	A	S	E
Query Conservation
Alig confidence																																						.	.																.	.	.	.	.	.
Template Conservation																																						.	.																.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	.	.	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	.	.	.	.	.	.	I	V	T	A	G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S
Template Known Secondary structure		B		T	T									T	T	S	S														T	T	T					.	.				S	S	S										.	.	.	.	.	.					T	T								S							S
Template Predicted Secondary structure																																						.	.																.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.		.	.	.	.	.	.	.	510								.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																																																				.									.	.	.	.	.	.	.
Query SS confidence																																																				.									.	.	.	.	.	.	.
Query Sequence		Q	E	L	Q	A	A	L	D	N	A	W	V	S	E	F	L	P	L	L	P	Q	G	V	D	T	P	V	G	D	Q	A	A	R	L	S	V	G	Q	A	Q	R	V	A	V	A	R	A	L	L	N	.	P	C	S	L	L	L	L	D	.	.	.	.	.	.	.	E	P	A	A	S	L	D	A	H	S	E	Q	R	V
Query Conservation																																																				.									.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																														.									.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		E	D	W	G	K	L	S	M	A	I	G	E	I	S	.	.	.	.	.	.	.	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I
Template Known Secondary structure		S														.	.	.	.	.	.	.	T	S								S			B														T	S	S	S										G	G	G	S	B		S		T	T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		525	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.	.	.																					.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure											.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	A	L	N	A	A	S	L	.	.	R	Q	T	T	L	M	V	T	H	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	A	D	W	D	V	I	W	V	M	Q
Query Conservation											.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q	L	S	R	Q	V	E	Q	R	Q	D	K	R	P	M	L	S	D	L	R	E	S	G	Q	L	E	Q	D	A	D	I	I	E	F	L	Y
Template Known Secondary structure													T											G	G	G	T	T	S	S	S					G	G	G	G	T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions