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Job DescriptionP29018
Confidence95.58%DateThu Jan 5 11:45:34 GMT 2012
Rank190Aligned Residues132
% Identity18%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380.........390.........400.... .....410.........420.........430.........440..
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Query Sequence  TLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQG. SLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDN
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Template Sequence  KVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRA. . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT






S
TT

TTS
TTT




TT
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   281........290.........300.........310.........320.........330....
 
   443......450.........460.........470.........480.........490.........500.........510.........520..
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Query Sequence  VLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQ
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Template Sequence  . . . . . . . AAVEQLQVWGQRNNIPVIAQHTGADSASVI. . . . . . . . . . . . . FDAIQAAKARNIDVLIADTAGRLQNKSHLM
Template Known Secondary structure  .......TT



STT

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GGG
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   335....340.........350.........360.... .....370.........380.........390....
 
   523......530.. .......540.
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Query Sequence  RVMEALNAAS. . . . . . . LRQTTLMVT
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Template Sequence  EELKKIVRVMKKLDVEAPHEVMLTID
Template Known Secondary structure  TTT
TT

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   395....400.........410.........420
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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