Job Description P29018 Confidence 100.00% Date Thu Jan 5 11:45:34 GMT 2012 Rank 19 Aligned Residues 520 % Identity 15% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		Q	R	W	L	N	I	S	R	L	L	G	F	V	S	G	I	L	I	I	A	Q	A	W	F	M	A	R	I	L	Q	H	M	.	.	.	I	M	E	N	I	P	R	E	A	L	L	L	P	F	T	L	L	V	L	T	F	V	L	R	A	W	V	V	W	L	R	E	R	V	G	Y	H	A	G	Q	H	I	R	F	A
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.
Template Conservation
Template Sequence		K	D	K	E	I	Q	S	V	A	S	E	T	L	I	S	I	V	N	A	V	N	P	V	A	I	K	A	L	L	P	H	L	T	N	A	I	V	E	T	N	K	W	Q	E	K	I	A	I	L	A	A	F	S	A	X	V	D	A	A	K	D	Q	V	A	L	R	X	P	E	L	I	P	V	L	S	E	T	X	W	D
Template Known Secondary structure		S	S																		S		G	G	G																																			S																			T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	R	Q	V	L	D	R	L	Q	Q	A	G	P	A	W	I	Q	G	K	P	A	G	S	W	A	T	L	V	L	E	Q	I	D	D	M	H	D	Y	Y	A	R	Y	L	P	Q	M	A	L	A	V	S	V	P	L	L	I	V	V	A	I	F	P	S	N	W	A	A	A	L	I	L	L	G	T	A	P	L	I	P
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.
Template Sequence		T	K	K	E	V	K	A	A	A	T	A	A	X	T	K	A	T	E	T	V	D	N	K	D	I	E	R	F	I	P	S	L	I	Q	C	I	A	D	.	.	.	.	.	.	.	.	.	P	T	E	V	P	E	T	V	H	L	L	G	A	T	T	F	V	A	E	V	T	P	A	T	L	S	I	X	V	P	L	L	S
Template Known Secondary structure		S																G	G	G			S	S	T	T	G	G	G											.	.	.	.	.	.	.	.	.	G	G	G									T	T					S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.										.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	M	A	L	V	G	M	G	A	A	D	A	N	R	R	N	F	L	A	L	A	R	L	S	G	H	F	L	D	R	L	R	G	M	E	T	L	R	I	F	G	R	G	E	A	E	I	E	S	I	R	S	A	S	E	D	F	R	Q	R	T	M	E	V	L	R	L	A	F	L	S	S	G	I	L	E	F	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	L	N	E	R	E	T	G	I	K	R	K	S	A	V	I	I	D	N	X	C	K	L	V	E	D	P	Q	V	I	A	P	F	L	G	K	L	L	P	G	L	K	S	N	F	A	T	I	A	D	P	E	A	R	E	V	T	L	R	A	L	K	T	L	R	R	V	G	N	V	G	E	D	D	A	I	P	E	L
Template Known Secondary structure					T	S	S	S																T	T												T	T	T																															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.
Predicted Secondary structure																		.																																																										.	.	.	.	.
Query SS confidence																		.																																																										.	.	.	.	.
Query Sequence		S	L	S	I	A	L	V	A	V	Y	F	G	F	S	Y	L	.	G	E	L	D	F	G	H	Y	D	T	G	V	T	L	A	A	G	F	L	A	L	I	L	A	P	E	F	F	Q	P	L	R	D	L	G	T	F	Y	H	A	K	A	Q	A	V	G	A	A	D	S	L	K	T	F	M	E	T	.	.	.	.	.	P
Query Conservation																		.																																																										.	.	.	.	.
Alig confidence																		.																																																										.	.	.	.	.
Template Conservation
Template Sequence		S	H	A	G	D	V	S	T	T	L	Q	V	V	N	E	L	L	K	D	E	T	V	A	P	R	F	K	I	V	V	E	Y	I	A	A	I	G	A	D	L	I	D	E	R	I	I	D	Q	Q	A	W	F	T	H	I	T	P	Y	X	T	I	F	L	H	E	K	K	A	K	D	I	L	D	E	F	R	K	R	A	V
Template Known Secondary structure				T	T													T	T	T	S				G	G	G																	T	T			S								T					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	H	P	Q	R	G	E	A	E	L	A	S	T	D	P	V	T	I	E	A	E	E	L	F	I	T	S	P	E	G	K	T	L	A	G	P	L	N	F	T	L	P	A	G	Q	R	A	V	L	V	G	R	S	G	S	G	K	S	S	L	L	N	A	L	S	G	F	L	S	Y	Q	G	S	L	R	I	N	G	I
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		D	N	I	P	V	G	P	N	F	D	D	E	E	D	E	G	E	D	L	C	N	C	E	F	S	L	A	Y	.	G	A	K	I	L	L	N	K	T	Q	L	R	L	K	R	A	R	R	Y	G	I	C	G	P	N	G	C	G	K	S	T	L	X	R	A	I	A	N	G	Q	V	D	G	F	P	T	Q	E	E	C	R
Template Known Secondary structure		T	T	S									T	T	S	S														.	T	T													T	T								S	T	T	S	S										T	T		S	T	T				T	T	T	S
Template Predicted Secondary structure																														.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		E	L	R	D	L	S	P	E	S	W	R	K	H	L	S	W	V	G	Q	N	P	.	.	Q	L	P	A	A	T	L	R	D	N	V	L	L	A	R	P	D	A	S	E	Q	E	L	Q	A	A	L	D	N	A	W	V	S	E	F	L	P	L	L	P	Q	G	V	D	T	P	V	G	D	Q	A	A	R	L	S	V	G
Query Conservation																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.									.	.														.																													.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																								.																													.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	Y	V	E	H	D	I	D	G	T	H	S	D	T	S	V	L	D	F	V	F	E	.	S	G	V	G	T	K	E	A	I	K	D	K	L	I	E	F	G	F	T	D	E	X	I	A	X	P	I	S	.	.	.	.	.	.	.	.	.	.	A	L	S	G	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T								T	T	S	B							T	.	T			S													T								S	B	G	G	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																								.																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
															491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.		.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.											.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.
Predicted Secondary structure																																																													.																.
Query SS confidence																																																													.																.
Query Sequence		Q	A	Q	R	V	A	V	A	R	A	L	L	N	P	C	S	L	L	L	L	D	E	P	A	A	S	L	D	A	H	S	E	Q	R	V	M	E	A	L	N	A	A	S	L	R	Q	T	T	L	M	V	T	H	Q	L	E	D	L	A	.	D	W	D	V	I	W	V	M	Q	D	G	R	I	I	E	.	Q	G	R	Y
Query Conservation																																																													.																.
Alig confidence																																												.	.																.																.
Template Conservation																																												.	.
Template Sequence		W	K	X	K	L	A	L	A	R	A	V	L	R	N	A	D	I	L	L	L	D	E	P	T	N	H	L	D	T	V	N	V	A	W	L	V	N	Y	L	N	T	C	.	.	G	I	T	S	I	T	I	S	H	D	S	V	F	L	D	N	V	C	E	Y	I	I	N	Y	E	G	L	K	L	R	K	Y	K	G	N	F
Template Known Secondary structure														T	T		S						S	T	T	T	T																S	.	.		S							S										S							T	T							S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.			.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		568	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	S	V	A	G	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	F	V	K	K	C	P	A
Template Known Secondary structure									G	G
Template Predicted Secondary structure
Template SS confidence
		625	.	.	.	.	630	.	.	.