Job Description P29018 Confidence 96.69% Date Thu Jan 5 11:45:34 GMT 2012 Rank 117 Aligned Residues 122 % Identity 19% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

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		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		P	A	G	Q	R	A	V	L	V	G	R	S	G	S	G	K	S	S	L	L	N	A	L	S	G	F	L	S	Y	Q	G	.	S	L	R	I	N	G	I	E	L	R	D	L	S	P	E	S	W	R	K	H	L	S	W	V	G	Q	N	P	Q	L	P	A	A	T	L	R	D	N	V	L	L	A	R	P	D	A	S	E
Query Conservation																																	.
Alig confidence																																	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y	Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	S							S	T	T	S	S														T	T	T											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.		.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		Q	E	L	Q	A	A	L	D	N	A	W	V	S	E	F	L	P	L	L	P	Q	G	V	D	T	P	V	G	D	Q	A	A	R	L	S	V	G	Q	A	Q	R	V	A	V	A	R	A	L	L	N	P	C	S	L	L	L	L	D	E	P	A	.	A	S	L	D	A	H	S	E	Q	R	V	M	E	A	L	N	A	A
Query Conservation																																																															.
Alig confidence		.	.	.	.	.	.	.	.	.																																																					.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	A	A	G	G	T	Q	L	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A	M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	T													T								T	T	S																T	T		S											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		532							.	.	.	.	.	.	.	540	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		S	.	.	.	.	.	.	L	R	Q	T	T	L	M	V	T
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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