Job Description P29018 Confidence 98.03% Date Thu Jan 5 11:45:34 GMT 2012 Rank 93 Aligned Residues 188 % Identity 20% Template c1wbdA_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of e. coli dna mismatch repair enzyme2 muts, e38q mutant, in complex with a g.t mismatch Resolution 2.40 Å

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		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360					.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		F	F	Q	P	L	R	D	L	G	T	F	Y	H	A	K	A	Q	A	V	G	A	A	D	S	L	K	T	F	M	E	T	P	L	A	H	P	Q	R	G	E	A	E	L	A	S	T	D	P	V	T	I	E	A	E	E	L	F	I	T	S	P	.	.	.	.	E	G	K	T	L	A	G	P	L	N	F	T	L	P	A
Query Conservation																																																															.	.	.	.
Alig confidence																																																															.	.	.	.												.
Template Conservation																																																																														.
Template Sequence		Y	E	E	L	F	D	L	L	L	P	H	L	E	A	L	Q	Q	S	A	S	A	L	A	E	L	D	V	L	V	N	L	A	E	R	A	Y	T	L	N	Y	T	C	P	T	F	I	D	K	P	G	I	R	I	T	E	G	R	H	P	V	V	E	Q	V	L	N	E	P	F	I	A	N	P	L	N	L	.	S	P	Q
Template Known Secondary structure										G	G	G																											T	T		B						S	S	S										T	T						S	S										.		S	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	Q	R	A	V	L	V	G	R	S	G	S	G	K	S	S	L	L	N	A	L	S	G	F	L	S	Y	Q	G	S	L	R	I	N	G	I	E	L	R	D	L	S	P	E	S	W	R	K	H	L	.	S	W	V	G	Q	N	P	Q	L	P	A	A	T	L	R	D	N	V	L	L	A	R	P	D	A	S	E	Q	E
Query Conservation																																																				.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	M	L	I	I	T	G	P	N	M	G	G	K	S	T	Y	M	R	Q	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	L	M	A	Y	I	G	S	Y	V	P	A	Q	K	V	E	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S									T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			B	S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.																					.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.				.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure																																																												.	.	.									.
Query SS confidence																																																												.	.	.									.
Query Sequence		L	Q	A	A	L	D	N	A	W	V	S	E	F	L	P	L	L	P	Q	G	V	D	T	P	V	G	D	Q	A	A	R	L	S	V	G	Q	A	Q	R	V	A	V	A	R	A	L	L	N	P	C	S	L	L	L	L	D	E	P	.	.	.	A	A	S	L	D	A	H	S	.	E	Q	R	V	M	E	A	L	N	A
Query Conservation																																																												.	.	.									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.																											.	.	.									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	D	R	I	F	T	R	V	G	.	.	.	.	.	.	F	M	V	E	M	T	E	T	A	N	I	L	H	N	A	T	E	Y	S	L	V	L	M	D	E	I	G	R	G	T	S	T	Y	D	G	L	S	L	A	W	A	C	A	E	N	L	A	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.																	T	T							S					S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template SS confidence
																		649	650	.	.	.	.	.	.	.	.							.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	R	Q	T	T	L	M	V	T	H	Q	L	E	D	L	A	D
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	I	K	A	L	T	L	F	A	T	H	Y	F	E	L	T	Q	L
Template Known Secondary structure		.	T	T									S		G	G	G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			718	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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