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Job DescriptionP29018
Confidence100.00%DateThu Jan 5 11:45:34 GMT 2012
Rank34Aligned Residues214
% Identity26%Templatec1oxtB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TIEAEELFITSP. EGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQ. GSLRINGIELRDLSPESWRKH. .
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Template Sequence  RIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDR
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GGGT
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Query Sequence  . LSWVGQNPQLPAA. TLRDNVLLARPDAS. . . . . . EQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAV
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Template Sequence  KIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFP. . . . . . . . . . . RELSGGQQQRVAL
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GGGTTSS

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   497..500.........510.........520.........530... ......540........ .550.........560.........570...
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Query Sequence  ARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASL. . RQTTLMVTHQLEDLA. DWDVIWVMQDGRIIEQGRYAELSVA
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Template Sequence  ARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDN
Template Known Secondary structure  TT

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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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