 |
Job Description | P75995 | Confidence | 60.83% | Date | Wed Jan 25 15:21:04 GMT 2012 |
Rank | 234 | Aligned Residues | 70 |
% Identity | 16% | Template | d1ji1a3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.60 |
|
 |
  |   |
381 | . | . | . | . | . | . | . | . | 390 | . | . | . | . | |
. | . | . | . | |
. | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | |
|
|
|
. | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  | . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
Query Sequence |   |
V | D | E | S | L | V | Q | R | L | N | I | L | H | E | . |
N | G | F | V | . |
I | A | L | D | D | F | G | T | G | Y | S | G | L | S | Y | L | H | D | L | H | I | D | Y | I | K | I | D | H | S | F | V | G | R | V | N | A | D | P | E | S | T | R | I | L | D | C | V | L | D | L | A | R | K | L | . |
. |
. |
. |
S | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |
|   |   | . |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
| . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |
|
|
|   |   |
|   |
|   |
|
| . | . | . |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   | . | . | . | . | . | . | . | . |
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|
Template Sequence |   |
D | L | A | G | I | D | Q | K | L | G | Y | I | K | K | T | L | G | A | N | I | L | Y | L | N | P | I | . |
. |
. |
F | K | A | P | T | N | H | K | Y | D | T | Q | D | Y | M | A | V | D | P | A | F | . |
. |
. |
. |
. |
. |
. |
. |
G | D | N | S | T | L | Q | T | L | I | N | D | I | H | S | T | A | N | G | P | K | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T |  |  |  |  |  | T | T | T |
|
|
|  |  |  |  | S |
|
| . | . | . |  |  |
| S | S | S | S |
|
| S |
| S |  |  |  |  |  |
| T | T | T | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S | S | S |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
  |
  |   |
455 | . | . | . | . | 460 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
S | I | V | A | E | G | V |
Query Conservation |   |
  |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|
Template Sequence |   |
Y | L | I | L | D | G | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|