 |
Job Description | P75995 | Confidence | 87.72% | Date | Wed Jan 25 15:21:04 GMT 2012 |
Rank | 87 | Aligned Residues | 109 |
% Identity | 16% | Template | d1a04a2 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 2.20 |
|
 |
  |   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | D | E | S | L | V | Q | R | L | N | I | L | H | E | N | G | F | V | I | A | L | D | D | F | G | T | G | Y | S | G | L | S | Y | L | H | D | L | H | I | D | Y | I | K | I | D | H | S | F | V | G | R | V | N | A | D | P | E | S | T | R | I | L | D | C | V | L | D | L | A | R | K | L | S | I | S | I | V | A | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |   |
| . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
| . |
|   |   |
|
Template Sequence |   |
D | H | P | M | L | R | T | G | V | K | Q | L | I | S | M | A | P | D | I | T | V | V | G | E | A | S | N | G | E | Q | G | I | E | L | A | E | S | L | D | P | D | L | I | L | L | D | L | N | M | . |
. |
. |
. |
. |
P | G | M | N | G | L | E | T | L | D | K | L | R | E | K | S | L | S | G | R | I | . |
V | V | F | S |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  | T | T | S | . | . | . | . | . | T | T | S |
|  |  |  |  |  |  |  |  |  |  | S |
|
|
| S |  |  | . |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . |
  |
  |   |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | E | T | K | E | Q | L | D | Y | L | N | Q | N | Y | I | T | F | Q | Q | G | Y | Y | F | Y | K | P | V | T | Y | I | D | L | V | K | I | I | L | S |
Query Conservation |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
V | S | N | H | E | E | D | V | V | T | A | L | K | R | G | A | D | G | . |
. |
. |
. |
Y | L | L | K | D | M | E | P | E | D | L | L | K | A | L | H | Q |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
| S |  | . | . | . | . |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|