Job Description P75995 Confidence 54.45% Date Wed Jan 25 15:21:04 GMT 2012 Rank 249 Aligned Residues 160 % Identity 16% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.													.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		F	S	A	S	H	I	I	S	P	T	F	V	D	E	C	L	N	F	R	D	S	F	T	R	R	D	L	N	L	V	L	E	V	T	E	R	E	P	L	N	V	D	.	.	.	.	.	.	.	.	.	.	.	.	E	S	L	V	Q	R	L	N	I	L	H	E	N	G	F	V	I	A	L	D	D	F	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence																											.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		V	P	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	.	.	.	.	.	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I	R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F
Template Known Secondary structure		S		T	T	S																	T	T			.	.	.	.	.																T		T	T																			T										S	S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
															405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440				.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G	Y	S	G	L	S	Y	L	H	D	L	H	I	D	Y	I	K	I	D	H	S	F	V	G	R	V	N	A	D	P	E	S	T	R	.	.	.	I	L	D	C	V	L	D	L	A	R	K	L	S	I	S	I	V	A	E	G	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																					.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A	E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F
Template Known Secondary structure		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T																									T									S	S	S	S			T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
							461	.	.	.	.	.	.	.	.	470	.							.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.												.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.												.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	V	E	T	K	E	Q	L	D	Y	L	N	.	.	.	.	.	.	Q	N	Y	I	T	F	Q	Q	G	Y	Y	F	Y	K	P	V	.	T	Y	I	D	L	V	K	I	I	L	S	K	P	K	V	K	V	V
Query Conservation		.	.	.	.	.												.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.												.	.	.	.	.	.																	.
Template Conservation
Template Sequence		G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	N	D	V	L	A	M	T	E	Y	A	L	K	R	N	R	I	N	F	M
Template Known Secondary structure		T							S									T	T	S		S	T	T											T	T	S	T	T														T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions