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Job DescriptionP75995
Confidence89.05%DateWed Jan 25 15:21:04 GMT 2012
Rank76Aligned Residues150
% Identity9%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   317..320.........330.........340.........350.........360.........370.........380.........390......
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Query Sequence  MNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENG
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Template Sequence  LYEVFELIGD. . . . . . KDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFE. ERVIISSFNHYSLRDVKK. . . . . . . . MAPH
Template Known Secondary structure  TT......S



SSS

TTTT
T.TTS
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TT
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   102.......110. ........120.........130.........140.... .....150.........160.. ....
 
   397..400.........410.........420.........430.........440.........450.........460.........470......
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Query Sequence  FVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNYIT
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Template Sequence  LKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNII. . . . . . . . . . . . PELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVD
Template Known Secondary structure  S
S

SSTTT
SBGGG

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B


ST
S
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   167..170.........180.........190.........200 .........210.........220.........230....
 
   477..480.........490.........
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Query Sequence  FQQGYYFYKPVTYIDLVKIILSK
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Template Sequence  GIITDD. . . . . . PETLINLVRKG
Template Known Secondary structure  S
......TTT
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   235....240 .........250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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