Job Description P75995 Confidence 39.06% Date Wed Jan 25 15:21:04 GMT 2012 Rank 301 Aligned Residues 105 % Identity 15% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	E	S	L	V	Q	R	L	N	I	L	H	E	N	G	F	V	I	A	L	D	D	F	G	T	G	Y	S	G	L	S	Y	L	H	D	L	H	I	D	Y	I	K	I	D	H	S	F	V	G	R	V	N	A	D	P	E	S	T	R	I	L	D	C	V	L	D	L	A	R	K	L	S	I	S	I	V	A	E
Query Conservation
Alig confidence																							.	.																								.	.	.	.					.																					.
Template Conservation																							.	.																								.	.	.	.					.																					.
Template Sequence		D	D	K	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	.	.	S	A	E	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	.	.	.	.	L	L	L	P	.	D	V	N	G	L	E	I	L	K	W	I	K	E	R	S	P	E	T	E	V	.	I	V	I	T
Template Known Secondary structure																		T					.	.			S	S											S			S						.	.	.	.	S	B		S	.	S	S	B													T	T	S			.
Template Predicted Secondary structure																							.	.																								.	.	.	.					.																					.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	T	K	E	Q	L	D	Y	L	N	Q	N	Y	I	T	F	Q	Q	G	Y	Y	F	Y	K	P	V	T	Y	I	D	L	V	K	I	I
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		G	H	G	T	I	K	T	A	V	E	A	M	K	M	G	A	Y	D	F	.	.	.	.	L	T	K	P	C	M	L	E	E	I	E	L	T	I
Template Known Secondary structure			T	T										T	T	T					.	.	.	.				S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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