Job Description P77280 Confidence 100.00% Date Thu Jan 5 12:27:11 GMT 2012 Rank 41 Aligned Residues 340 % Identity 15% Template c3iupB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution Resolution 1.70 Å

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		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		M	K	N	S	K	A	I	L	.	Q	V	P	G	T	M	K	I	I	S	A	E	I	P	V	P	K	E	D	E	V	L	I	K	V	E	Y	V	G	I	C	G	S	D	V	H	G	F	E	S	G	P	F	I	P	P	K	D	P	N	Q	E	I	G	L	G	H	E	C	A	G	T	V	V	A	V	G	S	R	V	R
Query Conservation										.
Alig confidence										.																																														.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		L	Q	L	R	S	R	I	K	S	S	G	E	L	E	L	S	L	D	S	I	D	T	P	H	P	G	P	D	E	V	L	I	R	I	E	A	S	P	L	N	P	S	D	L	G	L	L	F	G	A	A	D	X	S	.	.	.	.	T	A	K	A	S	G	T	A	E	R	P	I	V	T	A	R	V	P	E	G	A	X
Template Known Secondary structure										T	T	S																T	T																					T	T					.	.	.	.								S	S	S									G	G	G	G
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	K	P	G	D	R	V	N	I	E	P	G	V	P	C	G	H	C	R	Y	C	L	E	G	K	Y	N	I	C	P	D	V	D	F	M	A	T	Q	P	N	Y	R	G	A	L	T	H	Y	L	C	H	P	E	S	F	T	Y	K	L	P	D	N	M	D	T	M	E	G	A	L	V	E	P	A	A	V	G	M	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	X	A	G	R	L	D	A	S	X	P	V	G	N	E	G	A	G	V	V	V	E	A	G	S	S	P	A	A	Q	A	L	X	G	K	T	V	A	A	I	G	G	A	X	Y	S	Q	Y	R	C	I	P	A	D	Q	C	L	V	L	P	E	G	A	T	P	A	D	G	A	S	S	F	V	N	P	L	T	A	L
Template Known Secondary structure		G	G	G	G	G	G	T	T							S											S	S					T	T	T	T								S			S	B	S						G	G	G						T	T							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		A	A	M	L	A	D	V	K	P	G	K	K	I	I	I	L	.	G	A	G	C	I	G	L	M	T	L	Q	A	C	K	C	L	G	A	T	E	I	A	V	V	D	V	L	E	K	R	L	A	M	A	E	Q	L	G	A	T	V	V	I	N	G	A	K	E	D	T	I	A	R	C	Q	Q	F	T	E	D	M	G	A
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		G	X	V	E	T	X	R	L	E	G	H	S	A	L	V	H	T	A	A	A	S	N	L	G	Q	X	L	N	Q	I	C	L	K	D	G	I	K	L	V	N	I	V	R	K	Q	E	Q	A	D	L	L	K	A	Q	G	A	V	H	V	C	N	A	A	S	P	T	F	X	Q	D	L	T	E	A	L	V	S	T	G	A
Template Known Secondary structure										T	T		S					S	S	T	T	S														T								S	S										T	T		S					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.																	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.											.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	V	F	E	T	A	G	S	A	V	T	V	K	Q	A	P	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	R	G	G	K	I	M	I	V	G	T	V	P	G	D	S	A	I	N	F	L	K	I	N	R	E	V	T	I	Q	T	V	F	.	.	.	.	.	.	.	.	.	.	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	A	F	D	A	T	G	G	G	K	L	G	G	Q	I	L	T	C	X	E	A	A	L	N	K	S	A	R	E	Y	S	R	Y	G	S	T	T	H	K	Q	V	Y	L	Y	G	G	L	D	T	S	P	T	E	F	N	R	N	F	G	X	A	W	G	X	G	G	W	L	L	F	P	F	L	Q	K	I	G	R	E
Template Known Secondary structure							S					S																T			S			T	T			S	S										S											S		S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		Y	A	N	R	Y	P	V	T	I	E	A	I	S	S	G	R	F	D	V	K	S	M	V	T	H	I	Y	D	Y	R	D	V	Q	Q	A	.	.	F	E	E	S	V	N	N	K	R	D	I	I	K	G	V	I	K	I	S	D
Query Conservation																																					.	.
Alig confidence																						.	.														.	.											.
Template Conservation																						.	.																										.
Template Sequence		R	A	N	A	L	K	Q	R	V	V	A	E	L	K	T	T	F	A	S	H	.	.	Y	S	K	E	I	S	L	A	E	V	L	D	L	D	X	I	A	V	Y	N	K	R	A	T	G	.	E	K	Y	L	I	N	P	N	K
Template Known Secondary structure													T	T	T	T	T	T				.	.		S									T									T	T			T	T	.							T	T	T
Template Predicted Secondary structure																						.	.																										.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions