Job Description P77280 Confidence 99.77% Date Thu Jan 5 12:27:11 GMT 2012 Rank 86 Aligned Residues 285 % Identity 15% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		P	V	P	K	E	D	E	V	L	I	K	V	E	Y	V	G	I	C	G	S	D	V	H	G	F	E	S	G	P	F	I	P	P	K	D	P	N	Q	E	I	G	L	G	H	E	C	A	G	T	V	V	A	V	G	S	R	V	R	.	K	F	K	P	G	D	R	V	N	I	E	P	G	V	P	C	G	H	C	R	Y
Query Conservation																																																												.
Alig confidence																															.	.	.	.	.	.	.	.																						.																.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Sequence		L	P	A	S	C	Q	D	R	L	C	S	V	Y	Y	T	S	L	N	F	R	D	V	M	L	A	T	G	K	L	.	.	.	.	.	.	.	.	S	P	D	S	I	P	G	K	W	L	T	R	D	C	M	L	G	M	E	F	S	G	R	D	A	S	G	R	R	V	M	G	M	V	P	A	E	.	.	.	.	.	.
Template Known Secondary structure				T	T	S	T	T	T																			T	S	S	.	.	.	.	.	.	.	.		G	G	G			S			S		S	S												T	T									S	S		.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template SS confidence
		1555	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.									.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		C	L	E	G	K	Y	N	I	C	P	D	V	D	F	M	A	T	Q	P	N	Y	R	G	A	L	T	H	Y	L	C	H	P	E	S	F	T	Y	K	L	P	D	N	M	D	T	M	E	G	A	L	V	E	P	A	A	V	G	M	H	A	.	.	A	M	L	A	D	V	K	P	G	K	K	I	I	I	L	G	A	G
Query Conservation																																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	T	S	V	L	L	L	Q	H	A	T	W	E	V	P	S	T	W	T	L	E	E	A	A	S	V	P	I	V	Y	T	T	A	Y	Y	S	L	V	V	R	G	R	M	Q	P	G	E	S	V	L	I	H	S	G	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B	S						G	G	G						T	T	S						T	T													T	T	T	T				T	T								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									1621	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		C	I	G	L	M	T	L	Q	A	C	K	C	L	G	A	T	E	I	A	V	V	D	V	L	E	K	R	L	A	M	A	E	Q	.	.	.	.	L	G	A	T	V	V	I	N	G	A	K	E	D	T	I	A	R	C	Q	Q	F	T	E	D	M	G	A	D	I	V	F	E	T	A	G	S	A	V	T	V	K	Q	A
Query Conservation																																			.	.	.	.
Alig confidence																																			.	.	.	.																																		.
Template Conservation																																																																								.
Template Sequence		G	G	V	G	Q	A	A	I	A	I	A	L	S	R	G	C	R	V	F	T	T	V	G	S	A	E	K	R	A	Y	L	Q	A	R	F	P	Q	L	D	E	T	C	F	A	N	S	R	D	T	S	F	E	Q	H	V	L	R	H	T	A	G	K	G	V	D	L	V	L	N	S	.	L	A	E	E	K	L	Q	A	S
Template Known Secondary structure		S													T	T								S													T	T			S	T	T				S	S	S	S									T	T	T	T										.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		1678	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.		.	.	1750	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.											.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	L	V	M	R	G	G	K	I	M	I	V	G	.	.	T	V	P	G	D	S	A	I	N	F	L	K	I	N	R	E	V	T	I	Q	T	V	F	R	Y	.	.	.	.	.	.	.	.	.	.	A	N	R	Y	P	V	T	I	E	A	I	S	S	G	R	F	D	V	K	S	M	V	T	H	I	Y	D	Y	R
Query Conservation																.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																										.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																																																										.	.
Template Sequence		V	R	C	L	A	Q	H	G	R	F	L	E	I	G	K	F	D	L	S	N	N	H	A	L	G	M	A	V	F	L	K	N	V	T	F	H	G	I	L	L	D	S	L	F	E	E	G	G	A	T	W	Q	E	V	S	E	L	L	K	A	G	I	Q	E	G	V	V	Q	P	L	K	C	.	.	T	V	F	P	R	T
Template Known Secondary structure			T	T																	T	T					T	T	G	G	G	G	T								T					T	S																	T	T	T		S						.	.					S	S
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		1757	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.			.	1830	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	Q	Q	A	F	E	E	S	V	N	N	K	R	D	I	I	K	G	V	I	K	I	S	D
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		K	V	E	A	A	F	R	Y	M	A	Q	G	K	.	H	I	G	K	V	V	I	Q	V	R	E
Template Known Secondary structure		T										T	T		.		S	S						S	S
Template Predicted Secondary structure															.
Template SS confidence
		1835	.	.	.	.	1840	.	.	.	.	.	.	.		.	.	1850	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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