Job Description P77280 Confidence 100.00% Date Thu Jan 5 12:27:11 GMT 2012 Rank 38 Aligned Residues 312 % Identity 22% Template c2h6eA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-arabinose 1-dehydrogenase; PDBTitle: crystal structure of the d-arabinose dehydrogenase from sulfolobus2 solfataricus Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	N	S	K	A	I	L	Q	V	P	G	T	M	K	I	I	S	A	E	I	P	V	P	K	E	D	E	V	L	I	K	V	E	Y	V	G	I	C	G	S	D	V	H	G	F	E	S	G	P	F	I	P	P	K	D	P	N	Q	E	I	G	L	G	H	E	C	A	G	T	V	V	A	V	G	S	R	V	R	K
Query Conservation
Alig confidence														.	.	.	.																																	.	.																										.
Template Conservation														.	.	.	.																																	.	.																										.
Template Sequence		V	K	S	K	A	A	L	L	K	K	F	S	.	.	.	.	E	D	V	N	I	P	E	P	Q	G	E	E	V	L	I	R	I	G	G	A	G	V	C	R	T	D	L	R	V	W	K	G	.	.	V	E	A	K	Q	G	F	R	L	P	I	I	L	G	H	E	N	A	G	T	I	V	E	V	G	.	E	L	A	K
Template Known Secondary structure						B					S			.	.	.	.										T	T																				T	T	.	.	S				T	T			S	S																.	T	T
Template Predicted Secondary structure														.	.	.	.																																	.	.																										.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	P	G	D	R	V	N	I	E	P	G	V	P	C	G	H	C	R	Y	C	L	E	G	K	Y	N	I	C	P	D	V	D	F	M	A	T	Q	P	N	Y	R	G	A	L	T	H	Y	L	C	H	P	E	S	F	T	Y	K	L	P	D	N	M	D	T	M	E	G	A	L	V	E	P	A	A	V	G	M	H	A
Query Conservation
Alig confidence																																											.	.
Template Conservation																																											.	.
Template Sequence		V	K	K	G	D	N	V	V	V	Y	A	T	W	G	D	L	T	C	R	Y	C	R	E	G	K	F	N	I	C	K	N	Q	I	I	P	G	Q	T	T	N	G	.	.	G	F	S	E	Y	M	L	V	K	S	S	R	W	L	V	K	L	N	S	L	S	P	V	E	A	A	P	L	A	D	A	G	T	T	S	M	G
Template Known Secondary structure				T	T							S		B			S		S	T	T	G	G	G	T		G	G	G		T	T		B		B	T	T	T	B			.	.	S	S	B	S					S		G	G	G					S	S	S						G	G	G	G	T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		A	M	L	A	.	.	.	.	D	V	K	P	G	K	K	I	I	I	L	G	A	G	C	I	G	L	M	T	L	Q	A	C	K	C	L	G	A	T	E	I	A	V	V	D	V	L	E	K	R	L	A	M	A	E	Q	L	G	A	T	V	V	I	N	G	A	K	E	D	T	I	A	R	C	Q	Q	F	T	E	D	M
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		A	I	R	Q	A	L	P	F	I	S	K	F	A	E	P	V	V	I	V	N	G	I	G	G	L	A	V	Y	T	I	Q	I	L	K	A	L	M	K	N	I	T	I	V	G	I	S	R	S	K	K	H	R	D	F	A	L	E	L	G	A	D	Y	V	S	E	M	K	D	A	E	S	L	I	N	K	L	T	D	G	L
Template Known Secondary structure											T	T		S	S									S															T	T								S												T		S																	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																.										.
Query SS confidence																																																.										.
Query Sequence		G	A	D	I	V	F	E	T	A	G	S	A	V	T	V	K	Q	A	P	Y	L	V	M	R	G	G	K	I	M	I	V	G	T	V	P	G	D	S	A	I	N	F	L	K	I	N	.	R	E	V	T	I	Q	T	V	F	.	R	Y	A	N	R	Y	P	V	T	I	E	A	I	S	S	G	R	F	D	V	K	S	M
Query Conservation																																																.										.
Alig confidence																																																.										.																						.	.
Template Conservation																																																																																.	.
Template Sequence		G	A	S	I	A	I	D	L	V	G	T	E	E	T	T	Y	N	L	G	K	L	L	A	Q	E	G	A	I	I	L	V	G	M	E	G	K	R	V	S	L	E	A	F	D	T	A	V	W	N	K	K	L	L	G	S	N	Y	G	S	L	N	D	L	E	D	V	V	R	L	S	E	S	G	K	I	K	P	Y	.	.
Template Known Secondary structure									S	S																										S	S												T	T								S															T	T	S	S				.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	H	I	Y	D	Y	R	D	V
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		I	I	.	K	V	P	L	G	R	Q
Template Known Secondary structure				.
Template Predicted Secondary structure				.
Template SS confidence
		316	.		.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions