Job Description P77280 Confidence 100.00% Date Thu Jan 5 12:27:11 GMT 2012 Rank 56 Aligned Residues 303 % Identity 13% Template c1zsvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent leukotriene b4 12- PDBTitle: crystal structure of human nadp-dependent leukotriene b4 12-2 hydroxydehydrogenase Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10								.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		N	S	K	A	I	L	Q	V	.	.	.	.	.	.	.	P	G	T	M	K	I	I	S	A	E	I	P	V	P	K	E	D	E	V	L	I	K	V	E	Y	V	G	I	C	G	S	D	V	H	G	F	E	S	G	P	F	I	P	P	K	D	P	N	Q	E	I	G	L	G	H	E	C	A	G	T	V	V	A	V	G
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.
Template Sequence		T	K	T	W	T	L	K	K	H	F	V	G	Y	P	T	N	S	D	F	E	L	K	T	S	E	L	P	P	L	K	N	G	E	V	L	L	E	A	L	F	L	T	V	D	P	Y	M	R	V	A	A	K	R	L	K	.	.	.	.	.	.	.	E	G	D	T	M	M	G	Q	Q	V	A	K	V	V	E	S	K	N
Template Known Secondary structure								S	S			S	S	S			G	G	G													T	T													T						G	G	G	S		.	.	.	.	.	.	.	T	T		B													S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	V	R	K	F	K	P	G	D	R	V	N	I	E	P	G	V	P	C	G	H	C	R	Y	C	L	E	G	K	Y	N	I	C	P	D	V	D	F	M	A	T	Q	P	N	Y	R	G	A	L	T	H	Y	L	C	H	P	E	S	F	T	Y	K	L	P	D	N	M	D	T	M	E	G	A	L	V	E	P	A	A
Query Conservation
Alig confidence				.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	.	.	.	L	P	K	G	T	I	V	L	A	S	P	G	W	T	T	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	D	G	K	D	L	E	K	L	L	T	E	W	P	D	T	I	P	L	S	L	A	L	G	T	V	G	M	P	G	L
Template Known Secondary structure		T	T	.	.	.	S		T	T									S	B	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T						T	T			T	T	S		G	G	G	G	G	T	T	T	S
Template Predicted Secondary structure				.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	H	A	A	M	L	A	D	V	K	P	G	K	K	I	I	I	L	G	A	G	C	I	G	L	M	T	L	Q	A	C	K	C	L	G	A	T	E	I	A	V	V	D	V	L	E	K	R	L	A	M	A	E	Q	L	G	A	T	V	V	I	N	G	A	K	E	D	T	I	A	R	C	Q	Q	F	T	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	Y	F	G	L	L	E	I	C	G	V	K	G	G	E	T	V	M	V	N	A	A	A	G	A	V	G	S	V	V	G	Q	I	A	K	L	K	G	C	K	V	V	G	A	V	G	S	D	E	K	V	A	Y	L	Q	K	L	G	F	D	V	V	F	N	Y	K	T	V	E	S	L	E	E	T	L	K	K	A	S
Template Known Secondary structure									T	T	S				S	S						S	S	T	T	S	T	T											T	T								S	S										T	T		S					T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.									.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.								.	.	.	.	.	300
Predicted Secondary structure																																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		M	G	A	D	I	V	F	E	T	A	G	S	A	V	T	V	K	Q	A	P	Y	L	V	M	R	G	G	K	I	M	I	V	.	.	.	.	.	.	.	.	G	T	V	P	G	D	S	A	I	N	F	L	K	I	N	R	E	V	T	I	Q	T	V	F	R	Y	A	.	.	.	.	.	.	.	N	R	Y	P	V	T
Query Conservation																																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	G	Y	D	C	Y	F	D	N	V	G	G	E	F	S	N	T	V	I	G	Q	M	K	K	F	G	R	I	A	I	C	G	A	I	S	T	Y	N	R	T	G	P	L	P	P	G	P	P	P	E	I	V	I	Y	Q	E	L	R	M	E	A	F	V	V	Y	R	W	Q	G	D	A	R	Q	K	A	L	K	D	L
Template Known Secondary structure		T	T								S	S										T	T													G	G	G	T	T			S	S													T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	A	I	S	S	G	R	F	D	V	K	S	M	V	T	H	I	Y	D	Y	R	D	V	Q	Q	A	F	E	E	S	V	N	N	K	R	D	I	I	K	G	V	I	K
Query Conservation
Alig confidence														.	.																								.
Template Conservation														.	.																								.
Template Sequence		L	K	W	V	L	E	G	K	I	Q	Y	K	.	.	E	Y	I	I	E	G	F	E	N	M	P	A	A	F	M	G	M	L	K	G	D	N	L	.	G	K	T	I	V	K
Template Known Secondary structure							T	T	S	S				.	.							G	G	G										T	T			S	.	S
Template Predicted Secondary structure														.	.																								.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions