Job Description P77280 Confidence 100.00% Date Thu Jan 5 12:27:11 GMT 2012 Rank 18 Aligned Residues 334 % Identity 20% Template c1yqxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sinapyl alcohol dehydrogenase; PDBTitle: sinapyl alcohol dehydrogenase at 2.5 angstrom resolution Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		M	K	N	S	K	A	I	L	Q	V	P	.	G	T	M	K	I	I	S	A	E	I	P	V	P	K	E	D	E	V	L	I	K	V	E	Y	V	G	I	C	G	S	D	V	H	G	F	E	S	G	P	F	I	P	P	K	D	P	N	Q	E	I	G	L	G	H	E	C	A	G	T	V	V	A	V	G	S	R	V	R
Query Conservation													.
Alig confidence													.																																											.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		V	K	A	F	G	W	A	A	R	D	Q	S	G	H	L	S	P	F	N	F	S	R	R	A	T	G	E	E	D	V	R	F	K	V	L	Y	C	G	V	C	H	S	D	L	H	S	I	K	N	D	W	G	F	S	.	.	.	.	M	Y	P	L	V	P	G	H	E	I	V	G	E	V	T	E	V	G	S	K	V	K
Template Known Secondary structure											S	T	T															T	T																					T	T	T	S			.	.	.	.		S	S	B															T	T
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.
Predicted Secondary structure														.																					.	.	.	.	.																																								.	.
Query SS confidence														.																					.	.	.	.	.																																								.	.
Query Sequence		K	F	K	P	G	D	R	V	N	I	E	P	.	G	V	P	C	G	H	C	R	Y	C	L	E	G	K	Y	N	I	C	P	D	.	.	.	.	.	V	D	F	M	A	T	Q	P	N	Y	R	G	A	L	T	H	Y	L	C	H	P	E	S	F	T	Y	K	L	P	D	N	M	D	T	M	E	G	A	L	.	.	V
Query Conservation														.																					.	.	.	.	.																																								.	.
Alig confidence														.																					.	.	.	.	.																																								.	.
Template Conservation
Template Sequence		K	V	N	V	G	D	K	V	G	V	G	C	L	V	G	A	C	H	S	C	E	S	C	A	N	D	L	E	N	Y	C	P	K	M	I	L	T	Y	A	S	I	Y	H	D	G	T	I	T	Y	G	G	Y	S	N	H	M	V	A	N	E	R	Y	I	I	R	F	P	D	N	M	P	L	D	G	G	A	P	L	L	C
Template Known Secondary structure		S			T	T							S						S	S	S					T	T		G	G	G		T	T				S	S	S	S	B		T	T	S		B				S	S	B	S						G	G	G						T	T	S						G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	A	A	V	G	M	H	A	A	M	L	A	D	V	K	P	G	K	K	I	I	I	L	G	A	G	C	I	G	L	M	T	L	Q	A	C	K	C	L	G	A	T	E	I	A	V	V	D	V	L	E	K	R	L	A	M	A	E	Q	L	G	A	T	V	V	I	N	G	A	K	E	D	T	I	A	R	C	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	I	T	V	Y	S	P	L	K	Y	F	G	L	D	E	P	G	K	H	I	G	I	V	G	L	G	G	L	G	H	V	A	V	K	F	A	K	A	F	G	S	K	V	T	V	I	S	T	S	P	S	K	K	E	E	A	L	K	N	F	G	A	D	S	F	L	V	S	R	D	Q	E	Q	M	Q	A	A	A	G
Template Known Secondary structure													T	T			S	T	T									S														T								S		G	G	G							T	T			S					T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.										.
Query SS confidence																																																					.										.
Query Sequence		F	T	E	D	M	G	A	D	I	V	F	E	T	A	G	S	A	V	T	V	K	Q	A	P	Y	L	V	M	R	G	G	K	I	M	I	V	G	T	V	P	G	D	S	A	I	N	F	L	K	I	N	.	R	E	V	T	I	Q	T	V	F	.	R	Y	A	N	R	Y	P	V	T	I	E	A	I	S	S	G	R	F
Query Conservation																																																					.										.
Alig confidence				.	.	.	.	.																																													.										.
Template Conservation				.	.	.	.	.
Template Sequence		T	L	.	.	.	.	.	D	G	I	I	D	T	V	S	A	V	H	P	L	L	P	L	F	G	L	L	K	S	H	G	K	L	I	L	V	G	A	P	E	K	P	L	E	L	P	A	F	S	L	I	A	G	R	K	I	V	A	G	S	G	I	G	G	M	K	E	T	Q	E	M	I	D	F	A	A	K	H	N	I
Template Known Secondary structure				.	.	.	.	.								S	S				S																				S	S											T	T	T								S																T	T
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		247	.						.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	S	M	V	T	H	I	Y	D	Y	R	D	V	Q	Q	A	F	E	E	S	V	N	N	K	R	D	I	I	K	G	V	I	K	I	S	D
Query Conservation
Alig confidence				.	.	.																						.
Template Conservation				.	.	.																						.
Template Sequence		T	A	.	.	.	D	I	E	V	I	S	T	D	Y	L	N	T	A	M	E	R	L	A	K	N	D	.	V	R	Y	R	F	V	I	D	V	G	N
Template Known Secondary structure				.	.	.							G	G	G										T	T		.	S	S	S
Template Predicted Secondary structure				.	.	.																						.
Template SS confidence
		322	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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