Phyre 2 alignment of P77280 with c1n9gF

Job Description P77280
Confidence 100.00% Date Thu Jan 5 12:27:11 GMT 2012

Rank 37 Aligned Residues 327

% Identity 16% Template c1n9gF_

PDB info PDB header:hydrolase Chain: F: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: mitochondrial 2-enoyl thioester reductase etr1p/etr2p2 heterodimer from candida tropicalis

Resolution 1.98 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.							.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence	M	K	N	S	K	A	I	L	Q	V	P	G	.	.	.	.	.	.	T	M	K	I	I	S	A	E	I	P	V	P	K	E	D	E	V	L	I	K	V	E	Y	V	G	I	C	G	S	D	V	H	G	F	E	S	G	P	F	I	P	P	.	.	.	.	.	.	K	D	P	N	Q	E	I	G	L	G	H	E	C	A
Query Conservation													.	.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation
Template Sequence	I	T	A	Q	A	V	L	Y	T	Q	H	G	E	P	K	D	V	L	F	T	Q	S	F	E	I	D	D	D	N	L	A	P	N	E	V	I	V	K	T	L	G	S	P	I	N	P	S	D	I	N	Q	I	Q	G	V	Y	P	S	K	P	A	K	T	T	G	F	G	T	A	E	P	A	A	P	C	G	N	E	G	L
Template Known Secondary structure									S	S		S															T	T				T	T																					T		S	S						B	S	T	T	S		S	S		B					S
Template Predicted Secondary structure
Template SS confidence
	24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

	69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	T	V	V	A	V	G	S	R	V	R	K	F	K	P	G	D	R	V	N	I	E	P	G	V	P	C	G	H	C	R	Y	C	L	E	G	K	Y	N	I	C	P	D	V	D	F	M	A	T	Q	P	N	Y	R	G	A	L	T	H	Y	L	C	H	P	E	S	F	T	Y	K	L	P	D	N	M	D	T	M	E	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	F	E	V	I	K	V	G	S	N	V	S	S	L	E	A	G	D	W	V	I	P	S	H	V	N	F	G	T	W	R	T	H	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	D	D	D	F	I	K	L	P	N	P	A	Q	S	K	A	N	G	K	P	N	G	L	T	I	N	Q	G
Template Known Secondary structure								T	T			S			T	T						S	S	S	S	S			S	B	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G													T	T		S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

	149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																				.	.	.																																							.	.	.	.
Query SS confidence																				.	.	.																																							.	.	.	.
Query Sequence	A	L	V	E	P	A	A	V	G	M	H	A	A	M	L	A	D	V	K	.	.	.	P	G	K	K	I	I	I	L	G	A	G	C	I	G	L	M	T	L	Q	A	C	K	C	L	G	A	T	E	I	A	V	V	D	V	L	E	K	R	.	.	.	.	L	A	M	A	E	Q	L	G	A	T	V	V	I	N	G	A
Query Conservation																				.	.	.																																							.	.	.	.
Alig confidence																				.	.	.																																							.	.	.	.
Template Conservation
Template Sequence	A	T	I	S	V	N	P	L	T	A	Y	L	M	L	T	H	Y	V	K	L	T	P	G	K	D	W	F	I	Q	N	G	G	T	S	A	V	G	K	Y	A	S	Q	I	G	K	L	L	N	F	N	S	I	S	V	I	R	D	R	P	N	L	D	E	V	V	A	S	L	K	E	L	G	A	T	Q	V	I	T	E	D
Template Known Secondary structure		T	S	T	T											S	S	S				T	T	T						S		T	T	S														T											T	T												T		S
Template Predicted Secondary structure
Template SS confidence
	167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

	222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																					.	.																						.
Query SS confidence																	.	.	.	.																																					.	.																						.
Query Sequence	K	E	D	T	I	A	R	C	Q	Q	F	T	E	D	M	G	.	.	.	.	A	D	I	V	F	E	T	A	G	S	A	V	T	V	K	Q	A	P	Y	L	V	M	R	G	G	K	I	M	I	V	G	T	V	P	G	D	.	.	S	A	I	N	F	L	K	I	N	R	E	V	T	I	Q	T	V	F	R	Y	A	.
Query Conservation																	.	.	.	.																																					.	.																						.
Alig confidence																	.	.	.	.																																					.	.																						.
Template Conservation
Template Sequence	Q	N	N	S	K	E	F	G	P	T	I	K	E	W	I	K	Q	S	G	G	E	A	K	L	A	L	N	C	V	G	G	K	S	S	T	G	I	A	R	K	L	N	N	N	G	L	M	L	T	Y	G	G	M	S	F	Q	P	V	T	I	P	T	S	L	Y	I	F	K	N	F	T	S	A	G	F	W	V	T	E	L
Template Known Secondary structure					T	T	T												T	S								S	S											T	S		T	T									S	T	T			B										S
Template Predicted Secondary structure
Template SS confidence
	247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

										295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.																										.
Query SS confidence	.	.	.	.	.	.	.	.	.																										.
Query Sequence	.	.	.	.	.	.	.	.	.	N	R	Y	P	V	T	I	E	A	I	S	S	G	R	F	D	V	K	S	M	V	T	H	I	Y	.	D	Y	R	D	V	Q	Q	A	F	E	E	S	V	N	N	K	R	D	I	I	K	G	V	I	K	I
Query Conservation	.	.	.	.	.	.	.	.	.																										.
Alig confidence	.	.	.	.	.	.	.	.	.																										.																	.
Template Conservation																																																				.
Template Sequence	L	K	N	N	K	E	L	K	T	S	T	L	N	Q	I	I	A	W	Y	E	E	G	K	L	T	D	A	K	S	I	E	T	L	Y	D	G	T	K	P	L	H	E	L	Y	Q	D	G	V	A	N	S	.	K	D	G	K	Q	L	I	T	Y
Template Known Secondary structure	T	T	T																		T	T														S	S	S												T	G	.	G	G	S
Template Predicted Secondary structure																																																				.
Template SS confidence
	327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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