Job Description P0ABU0 Confidence 100.00% Date Thu Jan 5 11:16:22 GMT 2012 Rank 7 Aligned Residues 256 % Identity 29% Template c3r0oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	F	E	D	I	R	Y	E	K	S	T	D	G	I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	M	I	Q	A	L	A	D	A	R	Y	D	D	N	I	G	V	I	I	L	T	G	A	G	D	K	A	F	C	S	G	G	D	Q	K	V	R	G	D	Y	G	G	Y	K	D
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		V	T	R	Q	A	A	V	V	E	R	R	.	G	N	V	A	L	I	T	I	D	R	P	D	A	R	N	A	V	N	G	A	V	S	T	A	V	G	D	A	L	E	E	A	Q	R	D	P	E	V	W	A	V	V	I	T	G	A	G	D	K	S	F	C	A	G	A	D	L	K	A	I	S	R	G	E	N	L	Y	H
Template Known Secondary structure				S		S							.	T	T									G	G	G	T	T		B																			T	T									S	S	S	S	B	S				B							T	T				S
Template Predicted Secondary structure													.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	G	V	H	H	L	N	V	L	D	F	Q	R	Q	I	R	T	C	P	K	P	V	V	A	M	V	A	G	Y	S	I	G	G	G	H	V	L	H	M	M	C	D	L	T	I	A	A	D	N	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	M	A	R	I	V	G	Q	K	K
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		A	.	.	.	E	H	P	E	W	G	F	A	G	Y	V	H	H	F	I	D	K	P	T	I	A	A	V	N	G	T	A	L	G	G	G	S	E	L	A	L	A	S	D	L	V	I	A	C	E	S	A	S	F	G	L	P	E	V	K	R	G	L	I	A	G	A	G	G	V	F	R	I	V	E	Q	L	P	R	K	V
Template Known Secondary structure		S	.	.	.	S		G	G	G		G	G	G	T	T	T				S	S								S	B			T									S	S						T	T						G	G	G	G	T	T	S			T	T	T									S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		87				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		A	R	E	I	W	F	L	C	R	Q	Y	D	A	K	Q	A	L	D	M	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W	C	R	E	M	L	Q	N	S	P	M	A	L	R	C	L	K	A	A	L	N	A	D	C	D	G	Q	.	.	.	.	A	G	L	Q	E	L	A	G	N	A	T	M
Query Conservation																																																																		.	.	.	.
Alig confidence																																																																		.	.	.	.
Template Conservation
Template Sequence		A	L	E	L	V	L	T	G	E	P	M	T	A	S	D	A	L	R	W	G	L	I	N	E	V	V	P	D	G	T	V	V	E	A	A	L	A	L	A	E	R	I	T	C	N	A	P	L	S	V	Q	A	S	K	R	V	A	Y	G	A	D	D	G	I	I	G	A	E	E	P	K	W	E	R	T	I	R	E	F	T
Template Known Secondary structure																					T	S	S	S					T	T															T	S														T			T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	Y	M	T	E	E	G	Q	E	G	R	N	A	F	N	Q	K	R	Q	P	D	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	L	K	S	E	D	A	K	E	G	P	L	A	F	A	E	K	R	Q	P	V	W	K
Template Known Secondary structure					T	S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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