Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABU0
Confidence100.00%DateThu Jan 5 11:16:22 GMT 2012
Rank71Aligned Residues248
% Identity17%Templatec3m6nA_
PDB info PDB header:lyaseChain: A: PDB Molecule:rpff protein; PDBTitle: crystal structure of rpff
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60... ......70.........80.........90.........100.
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Query Sequence  RYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADA. . . . RYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDS
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Template Sequence  IIEEPQRDVYWIHM. HADLRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRA
Template Known Secondary structure  TTTT.
TT


SB
T
SS
SSSSSB

B
T
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   18.20.........30. ........40.........50.........60.........70.........80.........90......
 
   102.......110.........120.........130.........140.........150.........160.........170......
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Query Sequence  . . . . . GVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVG
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Template Sequence  RLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRIS
Template Known Secondary structure  TGGGTT

S
TSSTT

GGGGGT



SSTTTS
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   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   177..180.........190.........200.........210.........220.........230.........240... ......250.....
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Query Sequence  QKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQ. AGLQELAGNATM
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Template Sequence  AHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESK. RTPHAWAAMQQVREMTTAVPLEEMMRITEIWVD
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   182.......190.........200.........210.........220....... ..230.........240.........250.........260
 
   256...260.........270.....
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Query Sequence  LFYMTEEGQEGRNAFNQKRQ
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Template Sequence  TAMQLGEKSLRTMDRLVRAQ
Template Known Secondary structure  TT

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   261........270.........280
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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