Job Description P0ABU0 Confidence 99.13% Date Thu Jan 5 11:16:22 GMT 2012 Rank 81 Aligned Residues 140 % Identity 15% Template c3kthD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Resolution 3.00 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	P	L	T	V	K	E	M	I	Q	A	L	A	D	A	R	Y	D	D	N	I	G	V	I	I	L	T	G	A	G	D	K	A	F	C	S	G	G	D	Q	K	V	R	G	D	Y	G	G	Y	K	D	D	S	G	V	H	H	L	N	V	L	D	F	Q	R	Q	I	R	T	C	P	K	P	V	V	A	M	V	A
Query Conservation
Alig confidence																													.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	D	N	V	A	N	S	I	V	S	Q	L	L	F	L	A	A	E	D	P	E	K	E	I	S	L	.	.	.	.	.	Y	I	N	S	P	G	G	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	M	A	I	Y	D	T	M	Q	F	I	K	P	K	V	S	T	I	C	I
Template Known Secondary structure		B																				S	S	S					.	.	.	.	.							B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	S
Template Predicted Secondary structure																													.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.																		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																		.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	S	I	G	G	G	H	V	L	H	M	M	C	D	.	.	L	T	I	A	A	D	N	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	M	A	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	Q	K	K	A	R	E	I	W	F	L	C	R
Query Conservation																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	A	A	S	M	G	A	F	L	L	A	A	G	E	K	G	K	R	Y	A	L	P	N	S	E	V	M	I	H	Q	P	L	G	G	A	Q	G	Q	A	T	E	I	E	I	A	A	K	R	I	L	L	L	R	D	K	L	N	K	V	L	A	E	R	T	G	Q	P	L	E	V	I	E	R	D	T	D	R	D	N
Template Known Secondary structure						T									S		T	T						T	T														S	S																																					T	S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	D	A	K	Q	A	L	D	M	G	L	V	N	T	V	V	P	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	S	A	E	E	A	L	E	Y	G	L	I	D	K	I	L	T	H	L	E
Template Known Secondary structure												T	S		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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