Job Description P0ABU0 Confidence 98.10% Date Thu Jan 5 11:16:22 GMT 2012 Rank 112 Aligned Residues 169 % Identity 11% Template c3glmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa Resolution 2.50 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	M	I	Q	A	L	A	D	A	R	Y	D	D	N	I	G	V	I	I	L	T	G	A	G	D	K	A	F	C	S	G	G	D	Q	K	V	R	G	D	Y	G	G	Y	K	D	D	S	G	V	H	H	L	N	V	L	D	F	Q	R
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		V	Y	I	V	A	S	D	N	K	K	M	A	G	A	W	V	P	G	Q	A	E	N	L	I	R	C	S	D	A	A	K	M	M	H	L	P	L	I	Y	L	L	N	C	S	G	V	E	.	.	.	.	.	.	.	F	P	N	Q	D	K	V	Y	P	N	R	R	G	G	G	T	P	F	F	R	.	.	.	.	N	S
Template Known Secondary structure									T	T	T	G	G	G		B		T	T																T												B		.	.	.	.	.	.	.	G	G	G					S	S	S	T	T	S	T	T						.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	R	T	C	P	K	P	V	V	A	M	V	A	G	Y	S	I	G	G	G	H	V	L	H	M	M	C	D	L	T	I	A	A	D	N	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	M	A	R	I	V	G	Q	K	K	A	R	E	I	W	F	L	C	R	Q	Y	D	A	K
Query Conservation
Alig confidence																																																.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.														.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	N	Q	L	G	I	P	V	I	V	G	I	Y	G	T	N	P	A	G	G	G	Y	H	S	I	S	P	T	I	L	I	A	H	Q	D	A	N	M	A	V	G	G	A	G	A	.	.	.	E	Q	I	I	A	A	Q	I	E	N	S	K	L	.	.	.	.	.	.	.	.	.	.	K	V	P	A	P	G	S	V
Template Known Secondary structure						T	T									S				T								S	S	S						T	T					S	S					.	.	.										T	T	T	T	.	.	.	.	.	.	.	.	.	.					T	T	B
Template Predicted Secondary structure																																																.	.	.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.											.	.	.	.	240	.	.	.
		194	.	.			.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure					.	.												.
Query SS confidence					.	.												.
Query Sequence		Q	A	L	.	.	D	M	G	L	V	N	T	V	V	P	L	.	A	D	L	E	K	E	T	V	R	W	C	R	E	M	L	Q	N	S	P
Query Conservation					.	.												.
Alig confidence					.	.												.
Template Conservation
Template Sequence		P	I	H	Y	D	E	T	G	F	F	R	E	V	Y	Q	N	D	L	G	V	I	D	G	I	K	K	Y	I	S	Y	L	P	A	Y	N	L
Template Known Secondary structure					T	T	T	S			S					S	S															S					G
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions