Job Description P0ABU0 Confidence 100.00% Date Thu Jan 5 11:16:22 GMT 2012 Rank 56 Aligned Residues 260 % Identity 24% Template c2pg8C_ PDB info PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog Resolution 3.00 Å

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		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		M	I	Y	P	D	.	E	A	M	L	Y	A	P	V	E	W	H	D	C	S	E	G	F	E	D	I	R	Y	E	K	S	T	D	G	I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	M	I	Q	A	L	A	D	A	R	Y	D	D	N	I	G	V	I	I	L	T	G	A	G	D
Query Conservation							.
Alig confidence							.																										.
Template Conservation																																	.
Template Sequence		M	L	R	P	T	P	R	A	L	E	L	L	P	E	F	V	R	T	G	E	V	E	M	E	A	V	H	L	E	R	R	.	D	G	V	A	R	L	T	M	C	R	D	D	R	L	N	A	E	D	G	Q	Q	V	D	D	M	E	T	A	V	D	L	A	L	L	D	P	G	V	R	V	G	L	L	R	G	G	V	M
Template Known Secondary structure		T	T	S								S								S					S	S	B						.	T	T									T	T	T	T	T		B		T	T																T	T										B
Template Predicted Secondary structure																																	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.															.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	A	F	C	S	G	G	D	Q	K	V	R	G	D	Y	G	G	Y	K	D	D	S	G	V	H	H	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	D	F	Q	R	Q	I	R	T	C	P	K	P	V	V	A	M	V	A	G	Y	S	I	G	G	G	H	V	L
Query Conservation		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	P	R	Y	R	G	K	R	V	F	S	A	G	I	N	L	K	Y	L	S	Q	G	G	I	S	L	V	D	F	L	M	R	K	E	L	G	Y	I	H	K	L	V	R	G	V	L	T	N	D	D	R	P	G	W	W	H	S	P	R	I	E	K	P	W	V	A	A	V	D	G	F	A	I	G	G	G	A	Q	L
Template Known Secondary structure			S	G	G	G	T	T		B						B								T				T	T	T	T							T													T	T	S	T	T	T	T	T		S											S	S				T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	M	C	D	L	T	I	A	A	D	N	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	M	A	R	I	V	G	Q	K	K	A	R	E	I	W	F	L	C	R	Q	Y	D	A	K	Q	A	L	D	M	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		L	L	V	F	D	R	V	L	A	S	S	D	A	Y	F	S	L	P	A	A	K	E	G	I	I	P	G	A	A	N	L	.	R	L	G	R	F	A	G	P	R	V	S	R	Q	V	I	L	E	G	R	R	I	W	A	K	E	P	E	A	R	L	L	V	D	E	V	V	E	P	D	E	L	D	A	A	I	E	R	S
Template Known Secondary structure		T	T	S		S						T	T									S	S	S				T	T				.																T	S						T	T	S	G	G	G	G	G	T		S					T	T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	E	M	L	Q	N	S	P	M	A	L	R	C	L	K	A	A	L	N	A	D	C	D	G	Q	A	G	L	Q	E	L	A	G	N	A	T	M	L	F	Y	M	T	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	R	L	D	G	D	A	V	L	A	N	R	R	M	L	N	L	A	D	E	S	P	D	G	F	R	A	Y	M	A	E	F	A	L	M	Q	A	L	R	L	Y	G	H	D
Template Known Secondary structure			G	G	G		S															S																					T		T	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions