Job Description P0ABU0 Confidence 98.47% Date Thu Jan 5 11:16:22 GMT 2012 Rank 103 Aligned Residues 150 % Identity 16% Template c1x0uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii Resolution 2.20 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	M	I	Q	A	L	A	D	A	R	Y	D	D	N	I	G	V	I	I	L	T	G	A	G	D	K	A	F	C	S	G	G	D	Q	K	V	R	G	D	Y	G	G	Y	K	D	D	S	G	V	H	H	L	N	V	L	D	F	Q	R
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		V	F	A	Y	A	Q	D	F	T	V	L	G	G	S	L	G	E	T	H	A	N	K	I	V	R	A	Y	E	L	A	L	K	V	G	A	P	V	V	G	I	N	D	S	G	G	A	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	A	L	S	L	E	G	Y	G	A	V	F	K	.	M	N
Template Known Secondary structure									T	T	T	G	G	G		B																			T											S	B		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G														.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.															.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		Q	I	R	T	C	P	K	P	V	V	A	M	V	A	G	Y	S	I	G	G	G	H	V	L	H	M	M	C	D	L	T	I	A	A	D	N	.	.	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	M	A	R	I	V	G	Q	K	K	A	R	E	I	W	F	L	C	R	Q	Y	D
Query Conservation																																						.	.
Alig confidence																																						.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		V	M	A	S	G	V	I	P	Q	I	T	I	M	A	G	P	A	A	G	G	A	V	Y	S	P	A	L	T	D	F	I	I	M	I	K	G	D	A	Y	Y	M	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	P	E	I	T	K	.	.	V	V	L	G	E	E	V	S
Template Known Secondary structure					T	T	T	S								S				G	G	G	G						S	S							S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S					.	.			S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																					.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.
		192	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		A	K	Q	.	.	.	.	.	.	.	A	L	D	M	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W	C	R	E	M	L	Q
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.															.	.	.
Template Conservation																										.	.	.
Template Sequence		F	Q	D	L	G	G	A	V	V	H	A	T	K	S	G	V	V	H	F	M	V	D	S	E	.	.	.	Q	E	A	I	N	L	T	K	R	L	L	S
Template Known Secondary structure							B							T	T				S				S	S		.	.	.
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions