Job Description Q46906 Confidence 96.35% Date Thu Jan 5 12:35:44 GMT 2012 Rank 56 Aligned Residues 142 % Identity 13% Template d1vc4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.80

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																																																				.	.	.	.
Query SS confidence																					.	.	.	.	.	.																																																				.	.	.	.
Query Sequence		N	A	S	L	Q	L	A	I	D	S	E	C	Q	F	I	S	V	L	Y	.	.	.	.	.	.	G	N	I	C	T	I	S	N	I	V	K	K	I	K	N	A	G	K	Y	A	F	I	H	V	D	L	L	E	G	A	S	N	K	E	V	V	I	Q	F	L	K	L	V	T	E	A	D	G	I	I	S	.	.	.	.
Query Conservation																					.	.	.	.	.	.																																																				.	.	.	.
Alig confidence																					.	.	.	.	.	.													.	.	.						.	.	.	.	.																				.							.	.	.	.
Template Conservation																																							.	.	.						.	.	.	.	.																				.
Template Sequence		V	E	A	A	L	A	Y	A	R	G	G	A	R	A	V	S	V	L	T	E	P	H	R	F	G	G	S	L	L	D	L	K	R	V	R	E	A	.	.	.	V	D	L	P	L	.	.	.	.	.	L	R	K	D	F	V	V	D	P	F	M	L	E	E	A	R	A	F	G	.	A	S	A	A	L	L	I	V	A	L
Template Known Secondary structure											T	T		S									S	S	S														.	.	.			S			.	.	.	.	.				S				S										T	T	.		S
Template Predicted Secondary structure																																							.	.	.						.	.	.	.	.																				.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.
					89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.																																												.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence		.	.	.																																												.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		.	.	.	T	K	A	S	M	L	K	A	A	R	A	E	G	F	F	C	I	H	R	L	F	I	V	D	S	I	S	F	H	N	I	D	K	Q	V	A	Q	S	N	P	D	C	I	.	.	.	.	.	.	.	.	.	.	E	I	L	P	G	C	M	P	K	V	L	G	W	V	T	E	.	K	I	R	Q	P	L	I
Query Conservation		.	.	.																																												.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.																						.	.												.	.	.	.						.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																										.	.												.	.	.	.
Template Sequence		L	G	E	L	T	G	A	Y	L	E	E	A	R	R	L	G	L	E	A	L	V	E	V	H	.	.	T	E	R	E	L	E	I	A	L	E	A	.	.	.	.	G	A	E	V	L	G	I	N	N	R	D	L	A	T	L	H	I	N	L	E	T	A	P	R	L	G	R	L	A	R	K	R	G	F	G	G	V	L	V
Template Known Secondary structure			G	G	G												T									.	.	S											.	.	.	.	T		S						S	B		T	T	T			B		T	T												T	T			S
Template Predicted Secondary structure																										.	.												.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	L	V	C	D	E	E	D	A	R	N	A	I	N	A	G	V	V	A	L
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		A	E	S	G	Y	S	R	K	E	E	L	K	.	A	L	E	G	L	F	D	A	V
Template Known Secondary structure				S				S						.	T	T	T	T	T		S
Template Predicted Secondary structure														.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions