Job Description Q46906 Confidence 98.04% Date Thu Jan 5 12:35:44 GMT 2012 Rank 9 Aligned Residues 156 % Identity 12% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	S	L	Q	L	A	I	D	S	E	C	Q	F	I	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	G	N	I	C	T	I	S	N	I	V	K	K	I	K	N	A	G	K	Y	A	F	I	H	V	D	L	L	E	G	A	S	N	K	E	V	V	I	Q
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																																																																										.	.
Template Sequence		A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L	E	M	L	R	E	V	T	P	E	L	S	C	P	V	V	L	L	S	Y	Y	K	P	I	.	.	M	F	R	S	L	A
Template Known Secondary structure											T	T		S	S								S			T	T	S													T	T	T														G	G	G		S	S								S				.	.		S			T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.													.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	K	L	V	T	E	A	D	G	I	I	S	T	K	A	.	.	.	.	.	.	S	M	L	K	A	A	R	A	E	G	F	F	C	I	H	R	L	F	I	V	D	S	I	S	F	H	N	I	D	K	Q	V	A	Q	S	N	P	D	C	I	E	I	L	.	.	.	.	.	.	.	.	.	.	.	.	P	G	C
Query Conservation																		.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.										.	.	.	.	.	.														.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																													.	.	.
Template Sequence		K	M	K	E	A	G	.	V	H	G	L	I	V	P	D	L	P	Y	V	A	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L	.	.	.	V	L	L	T	T	P	A	I	P	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R
Template Known Secondary structure						T	T	.							T	T			T	T	T											T	T				.	.	.						T	T	S														S							S	S			B		T	T	S		B		T
Template Predicted Secondary structure								.																													.	.	.
Template SS confidence
		113	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	K	V	L	G	W	V	T	E	K	I	R	Q	P	L	I	A	G	G	L	V	C	D	E	E	D	A	R	N	A	I	N	A	G	V	V	A	L	S	T	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	S	L	I	Q	E	V	K	K	V	T	N	K	P	V	A	V	G	F	G	I	S	K	P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S
Template Known Secondary structure														S	S						S				S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions