Job Description Q46906 Confidence 44.20% Date Thu Jan 5 12:35:44 GMT 2012 Rank 316 Aligned Residues 165 % Identity 19% Template d1pkla2 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate kinase Resolution 2.35

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.			.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																										.	.																	.	.	.	.													.	.			.
Query SS confidence																										.	.																	.	.	.	.													.	.			.
Query Sequence		A	A	V	K	D	N	A	S	L	Q	L	A	I	D	S	E	C	Q	F	I	S	V	L	Y	.	.	G	N	I	C	T	I	S	N	I	V	K	K	I	K	N	A	.	.	.	.	G	K	Y	A	F	I	H	V	D	L	L	E	.	.	G	A	.	S	N	K	E	V	V	I	Q	F	L	K	L	V	T	E	A	D
Query Conservation																										.	.																	.	.	.	.													.	.			.
Alig confidence																										.	.																	.	.	.	.													.	.			.															.
Template Conservation																																																																															.
Template Sequence		P	S	T	Q	S	V	E	A	L	K	G	L	I	Q	S	G	M	S	V	A	R	M	N	F	S	H	G	S	H	E	Y	H	Q	T	T	I	N	N	V	R	Q	A	A	A	E	L	G	V	N	I	A	I	A	L	D	T	K	G	P	P	A	V	S	A	K	D	R	V	D	L	Q	F	G	V	E	Q	G	.	V	D
Template Known Secondary structure		G	G	G		S											T								T	T	S	S																			T	T															S															T	.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.
		85	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.														.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure				.	.	.	.															.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.															.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	.	.	.	.	I	S	T	K	A	S	M	L	K	A	A	R	A	E	.	.	.	G	F	F	C	I	H	R	L	F	I	V	D	S	I	S	F	H	N	I	D	K	Q	V	A	Q	S	N	P	D	C	I	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	L	P	G	C	M	P	K	V	L	G	W
Query Conservation				.	.	.	.															.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.															.	.	.																										.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.
Template Sequence		M	I	F	A	S	F	I	R	S	A	E	Q	V	G	D	V	R	K	A	L	G	P	K	G	R	D	I	M	I	I	C	K	I	E	N	H	Q	G	V	Q	N	I	D	S	I	I	E	E	.	.	S	D	G	I	M	V	A	R	G	D	L	G	V	E	I	P	A	E	K	V	V	V	A	Q	K	I	L	I	S	K
Template Known Secondary structure						T	T			S													G	G	G	T	T	S								S						T								.	.	S	S										T	T	T	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	E	K	I	R	Q	P	L	I	A	G	G	L	V	C	.	.	.	.	.	.	.	.	.	.	.	D	E	E	D	A	R	N	A	I	N	A	G	V	V	A	L	S	T	T	N	T
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	N	V	A	G	K	P	V	I	C	A	T	Q	M	L	E	S	M	T	Y	N	P	R	P	T	R	A	E	V	S	D	V	A	N	A	V	F	N	G	A	D	C	V	M	L	S	G	E
Template Known Secondary structure						T							S	S	S	S	G	G	G	G	T	S	S	S																T		S					S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions