 |
Job Description | Q46906 | Confidence | 94.22% | Date | Thu Jan 5 12:35:44 GMT 2012 |
Rank | 114 | Aligned Residues | 117 |
% Identity | 22% | Template | d1ofda2 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.00 |
|
 |
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | C | T | I | S | N | I | V | K | K | I | K | N | A | G | K | Y | A | F | I | H | V | D | L | L | E | G | A | S | N | K | E | V | V | I | Q | F | L | K | L | V | T | E | A | D | G | I | I | . |
. |
. |
. |
. |
. |
S | T | K | A | S | M | L | K | A | A | R | A | E | G | F | F | C | I | H | R | L | F | I | V | D |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |
|
|
|
| . | . | . | . | . | . |
|
|
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|   |   |
|
|   |   |
|
|
| . | . |
|
|
|
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|
|
|   |   |   | . | . | . | . | . | . |
Template Sequence |   |
S | I | E | D | L | A | Q | L | I | Y | D | L | H | Q | I | N | P | E | A | Q | V | S | V | K | L | V | A | E | I | G | I | G | T | I | A | A | G | V | A | K | . |
. |
A | N | A | D | I | I | Q | I | S | G | H | D | G | G | T | G | A | S | P | L | S | S | I | K | H | A | G | S | P | W | E | L | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |  |  |  |  | . | . | T | T |
| S |  |  |  |  |  |
| T | T |
|
|
| S | S |  |  |  |  |  |  |  |  | B |
|
|
|  |  |  | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1011 | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | |
|
. | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | |
|
|
|
|
|
  |
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | S | F | H | N | I | D | K | Q | V | A | Q | S | N | P | D | C | I | E | I | L | P | G | C | M | P | . |
. |
K | V | L | G | W | V | T | E | K | I | R | Q | P | L | I | A | G | G | L | V | C | D | E | E | D | A | R | N | A | I | N | A | G | V | V | A | L | S | T | T | N | T | G | V | W | T | L |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |
| . | . |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |
|
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |   |
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | T | E | V | H | R | V | L | M | E | N | Q | L | R | D | R | V | L | L | R | A | D | G | G | L | K | T | G | W | D | V | V | M | A | A | L | M | G | A | E | E | Y | G | F | G | S | I | A | M | I | A | E |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |
|  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
| S |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1083 | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|