Return to main results Retrieve Phyre Job Id

Job DescriptionQ46906
Confidence45.34%DateThu Jan 5 12:35:44 GMT 2012
Rank311Aligned Residues116
% Identity17%Templated1gvfa_
SCOP infoTIM beta/alpha-barrel Aldolase Class II FBP aldolase
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30........ .40.........50.........60.........70.........80.........90
Predicted Secondary structure 







......
















Query SS confidence 





















. . . . . .



















































Query Sequence  KDNASLQLAIDSECQFISVLYG. . . . . . NICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTK
Query Conservation 
    
  

 
    



 
...... 
  
   
   
  

 



 


 

  
   
 


     






Alig confidence 





















......



























........................
Template Conservation     
 
  

  









 

 



  
  

  

  

 





 


........................
Template Sequence  ESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGS. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TT



TTS
TT
S



........................
Template Predicted Secondary structure 















........................
Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140
 
   91........100.........110.........120.........130... ......140.........150.. ......
Predicted Secondary structure 






...........




.
Query SS confidence 










































. . . . . . . . . . .


















.





Query Sequence  ASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEI. . . . . . . . . . . LPGCMPKVLGWVTEKIRQP. LIAGGL
Query Conservation     
  

  

 



 




 

      
   






...........


  
  
  
      
.





Alig confidence  ..........



..........


















...........


















.





Template Conservation  ..........   
.......... 



  

  



 






 

 
   
 
    
  
     








Template Sequence  . . . . . . . . . . AFLT. . . . . . . . . . DPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGAS
Template Known Secondary structure  ..........
SS
..........


S
SS

SS

SS






S



T
Template Predicted Secondary structure  ..........



..........

























Template SS confidence 















































































   152... ....160.........170.........180.........190.........200.........210.
 
   159160.........170......
Predicted Secondary structure 





Query SS confidence 

















Query Sequence  VCDEEDARNAINAGVVAL
Query Conservation 
   


  

 


 

Alig confidence 

















Template Conservation 
   
    

  

 

Template Sequence  DVPDEFVRRTIELGVTKV
Template Known Secondary structure  T

TT
Template Predicted Secondary structure 





Template SS confidence 

















   212.......220.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions