 |
Job Description | Q46906 | Confidence | 72.52% | Date | Thu Jan 5 12:35:44 GMT 2012 |
Rank | 208 | Aligned Residues | 69 |
% Identity | 14% | Template | c3tr2A_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:orotidine 5'-phosphate decarboxylase; |
PDBTitle: structure of a orotidine 5'-phosphate decarboxylase (pyrf) from2 coxiella burnetii
|
Resolution | 2.00 Å |
|
 |
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | |
|
|
|
. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | I | V | D | S | I | S | F | H | N | I | D | K | Q | V | A | Q | S | N | P | . |
. |
D | C | I | E | I | L | P | G | C | M | . |
. |
. |
. |
P | K | V | L | G | W | V | T | E | K | I | R | Q | P | L | I | A | G | G | L | V | C | D | . |
. |
. |
. |
. |
E | E | D | A | R | N | A | I | N | A | G | V | V | A | L |
Query Conservation |   |
  |
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
| . | . |
|
|
|
|
|
|
|
|   |   | . | . | . | . |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   | . | . | . | . | . |   |
|
|
|   |   |
|
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   | . |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
I | V | A | I | D | A | G | T | V | E | Q | A | R | A | Q | I | N | P | L | T | P | E | L | C | H | L | K | I | G | S | I | L | F | T | R | Y | G | P | A | F | V | E | E | L | X | Q | K | . |
G | Y | R | I | F | L | D | L | K | F | Y | D | I | P | Q | T | V | A | G | A | C | R | A | V | A | E | L | G | V | W | X | X |
Template Known Secondary structure |   |
 |  |  |
|
|
| S | S |  |  |  |  |  |  |  |  | T | T |
|
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|
|  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
177 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
S |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
N |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
88 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|