Job Description Q46906 Confidence 97.27% Date Thu Jan 5 12:35:44 GMT 2012 Rank 24 Aligned Residues 130 % Identity 12% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																.	.	.	.																																		.	.	.	.	.	.
Query SS confidence																.	.	.	.																																		.	.	.	.	.	.
Query Sequence		T	I	S	N	I	V	K	K	I	K	N	A	G	K	.	.	.	.	Y	A	F	I	H	V	D	L	L	E	G	A	S	N	K	E	V	V	I	Q	F	L	K	L	V	T	E	A	D	G	I	I	S	.	.	.	.	.	.	T	K	A	S	M	L	K	A	A	R	A	E	G	F	F	C	I	H	R	L	F	I	V
Query Conservation																.	.	.	.																																		.	.	.	.	.	.
Alig confidence																.	.	.	.																								.	.									.	.	.	.	.	.																			.	.
Template Conservation																																											.	.																																	.	.
Template Sequence		D	I	H	S	V	F	E	L	L	A	R	I	K	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	.	.	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	.	.	L	V	S
Template Known Secondary structure												T				S	S																										.	.	T	T							T	T			G	G	G												T						.	.
Template Predicted Secondary structure																																											.	.																																	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.												.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	I	S	F	H	N	I	D	K	Q	V	A	Q	S	N	P	D	C	I	E	I	.	.	.	.	.	.	.	.	.	.	.	L	P	G	C	M	P	K	V	L	G	W	V	T	E	K	I	R	Q	P	L	I	A	G	G	L	V	C	D	E	E	D	A	R	N	A	I	N	A	G	V	V	A	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																																																																			.
Template Sequence		V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	.	K	R	X	R	K	V	A	D	G	V
Template Known Secondary structure		T	T	S										T	T			S								S		S	S																			T	T			S						S	S			S	S				.				T	T	T	S	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions