Return to main results Retrieve Phyre Job Id

Job DescriptionQ46906
Confidence47.54%DateThu Jan 5 12:35:44 GMT 2012
Rank299Aligned Residues51
% Identity20%Templatec3hbxB_
PDB info PDB header:lyaseChain: B: PDB Molecule:glutamate decarboxylase 1; PDBTitle: crystal structure of gad1 from arabidopsis thaliana
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30..... ....40.........50...... ...60........
Predicted Secondary structure 





.....




....




Query SS confidence 

















. . . . .




















. . . .











Query Sequence  DNASLQLAIDSECQFISV. . . . . LYGNICTISNIVKKIKNAGKY. . . . AFIHVDLLEGAS
Query Conservation      
  

 
    


.....
 
 
  
   
   
  

 ....



 


 

 
Alig confidence 

















.....




















....











Template Conservation 
   
   
   
  
        

 



  
  

         
   




 

 
Template Sequence  DPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGF
Template Known Secondary structure 


TTBS
TTT

B







TTGGG
Template Predicted Secondary structure 































Template SS confidence 



























































   191........200.........210.........220.........230.........240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions