Return to main results Retrieve Phyre Job Id

Job DescriptionQ46906
Confidence87.30%DateThu Jan 5 12:35:44 GMT 2012
Rank160Aligned Residues88
% Identity15%Templatec2yxbA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130... ......140........ .150.........160.....
Predicted Secondary structure 






......
.







Query SS confidence 








































. . . . . .














.
















Query Sequence  MLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEI. . . . . . LPGCMPKVLGWVTEK. IRQPLIAGGLVCDEEDA
Query Conservation   
  

  

 



 




 

      
   






......


  
  
  
   .   







   


Alig confidence 











...

























......














.
















Template Conservation 
   
   
 

...  

                 


 

  
             
        





       
Template Sequence  VARALRDAGFEV. . . VYTGLRQTPEQVAXAAVQEDVDVIGVSILNGAHLHLXKRLXAKLRELGADDIPVVLGGTIPIPDL
Template Known Secondary structure  TT
...


SB

TT
SSSS
TT
TTS



Template Predicted Secondary structure 


...

























Template SS confidence 















































































   40.........50. ........60.........70.........80.........90.........100.........110......
 
   166...170.........180...
Predicted Secondary structure 




Query SS confidence 

















Query Sequence  RNAINAGVVALSTTNTGV
Query Conservation    

 


 




   
Alig confidence 

















Template Conservation        
 
    

   
Template Sequence  EPLRSLGIREIFLPGTSL
Template Known Secondary structure  TT


TT

Template Predicted Secondary structure 






Template SS confidence 

















   117..120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions