Job Description Q46906 Confidence 34.88% Date Thu Jan 5 12:35:44 GMT 2012 Rank 366 Aligned Residues 116 % Identity 21% Template c2vdcF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:glutamate synthase [nadph] large chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. Resolution 9.50 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.
Query Sequence		N	I	C	T	I	S	N	I	V	K	K	I	K	N	A	G	K	Y	A	F	I	H	V	D	L	L	E	G	A	S	N	K	E	V	V	I	Q	F	L	K	L	V	T	E	A	D	G	I	I	.	.	.	.	.	.	S	T	K	A	S	M	L	K	A	A	R	A	E	G	F	F	C	I	H	R	L	F	I	V	D
Query Conservation																																																			.	.	.	.	.	.
Alig confidence																																										.	.								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		S	I	E	D	L	A	Q	L	I	Y	D	L	K	Q	I	N	P	D	A	K	V	T	V	K	L	V	S	R	S	G	I	G	T	I	A	A	G	V	A	K	.	.	A	N	A	D	I	I	L	I	S	G	N	S	G	G	T	G	A	S	P	Q	T	S	I	K	F	A	G	L	P	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S																T	T											T	T											.	.	T	T		S							T	T				S	S									S				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		976	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.			.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	S	F	H	N	I	D	K	Q	V	A	Q	S	N	P	D	C	I	E	I	L	P	G	C	M	P	K	V	L	G	W	V	T	E	K	I	R	Q	P	L	I	A	G	G	L	V	C	D	E	E	D	A	R	N	A	I	N	A	G	V	V	A	L	S	T	T	N	T	G	V
Query Conservation
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	W	E	M	G	L	S	E	V	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	T	L	N	R	L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A	M	L	G	A	E	E	F	G	I	G	T	A	S	L
Template Known Secondary structure		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		T	T	T	S						S	S			S										T	T		S
Template Predicted Secondary structure		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					1045	.	.	.	.	1050	.	.	.	.																.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions