 |
Job Description | Q46906 | Confidence | 95.27% | Date | Thu Jan 5 12:35:44 GMT 2012 |
Rank | 97 | Aligned Residues | 102 |
% Identity | 20% | Template | c2h6rG_ |
PDB info |
PDB header:isomerase | Chain: G: PDB Molecule:triosephosphate isomerase; |
PDBTitle: crystal structure of triosephosphate isomerase (tim) from2 methanocaldococcus jannaschii
|
Resolution | 2.30 Å |
|
 |
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | S | N | K | E | V | V | I | Q | F | L | K | L | V | T | E | A | D | G | I | I | S | T | K | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | M | L | K | A | A | R | A | E | G | F | F | C | I | H | R | L | F | I | V | D | S | I | S | F | H | N | I | D | K | Q | V | A | Q | S | N | P | D | C | I | E | I | L | P |
Query Conservation |   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|   |   |   |
|   |   |   |
| . |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |   |
|   | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
Template Sequence |   |
G | S | H | T | G | H | I | L | A | E | A | I | K | D | C | G | . |
C | K | G | T | L | I | N | H | S | E | K | R | M | L | L | A | D | I | E | A | V | I | N | K | C | K | N | L | G | L | E | T | I | V | C | T | N | N | I | N | T | S | . |
. |
. |
. |
. |
. |
K | A | V | A | A | L | S | P | D | C | I | A | V | E | P |
Template Known Secondary structure |   |
S | S |
| T | T |
|
|
|  |  |  |  |  |  |  | T | . |
|
|  |  |  |  | S | B | T | T | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | S | S | S | T | T |  | . | . | . | . | . | . |  |  |  | T | T | T |
|
| S |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
  |   |
136 | . | |
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | C | . |
M | P | K | V | L | G | W | V | T | E | K | I | R | Q | P | L | I | A | G | G | L | V | C | D | E | E | D | A | R | N | A | I | N | A | G | V | V | A | L |
Query Conservation |   |
|   | . |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |
|
|   |
|
|
|   |
|
|
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
P | E | G | T | V | R | A | V | K | E | I | N | . |
. |
K | D | V | K | V | L | C | G | A | G | I | S | K | G | E | D | V | K | A | A | L | D | L | G | A | E | G | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
| . | . | S | S |
|  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | |
|
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|