|   |
9 | 10 | . | . | . | . | . | . | |
|
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
. | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
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|  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  | . |  |  |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
| . |
. |
. |
. |
|
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| . |
. |
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|
| . |
. |
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| . |
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Query Sequence |   |
Q | N | P | V | I | A | A | V | . |
. |
. |
. |
K | D | N | A | S | L | Q | L | A | I | D | S | E | C | Q | F | I | S | V | . |
. |
L | Y | G | N | I | C | T | I | S | N | I | V | K | K | I | K | N | A | . |
. |
G | K | Y | A | F | I | . |
H | V | D | L | L | E | G | A | S | N | K | E | V | V | I | Q | F | L | K | L |
Query Conservation |   |
  |   |
|
|
|   |
|
| . | . | . | . |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|
|
| . | . |
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   | . | . |
|
|   |
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| . |
|   |
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|   |
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|   |   |
|   |   |   |
|   |
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|   |
Alig confidence |   |
|
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|
| . | . | . | . |
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| . | . |
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| . | . |
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| . |
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|
| . | . | . | . | . | . | . |
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|
Template Conservation |   |
  |
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |
|   |
|   | . | . | . | . | . | . | . |
|   |
|   |
|   |   |
|   |   |
Template Sequence |   |
R | L | L | V | A | A | A | V | G | V | T | S | D | T | F | E | R | A | E | A | L | F | E | A | G | A | D | A | I | V | I | D | T | A | H | G | H | S | A | G | V | L | R | K | I | A | E | I | R | A | H | F | P | N | R | T | L | I | A | G | N | I | A | . |
. |
. |
. |
. |
. |
. |
T | A | E | G | A | R | A | L | Y | D |
Template Known Secondary structure |   |
| B |
|
|  |  |  |  |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 290 | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
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Query Sequence |   |
V | T | E | A | D | G | I | I | S | T | K | A | S | . |
. |
. |
. |
M | L | K | A | A | R | A | E | G | F | F | C | I | H | R | L | F | I | V | D | S | I | S | F | H | N | I | D | K | Q | V | A | Q | S | N | P | D | C | I | E | I | L | P | G | C | M | P | K | V | L | G | W | V | T | E | K | I | R | Q | P | L | I | A |
Query Conservation |   |
  |   |   |   |
|
|
|
|
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|
|   |   | . | . | . | . |   |
|   |   |
|
|   |   |
|
|   |
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|   |
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|   |
|
|   |   |   |   |   |   |
|   |   |   |
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|
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
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|
|
|
|
Template Conservation |   |
|
| . |
|
|   |
|   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
A | G | . |
V | D | V | V | K | V | G | I | G | P | G | S | I | C | T | T | R | V | V | A | G | V | G | V | P | Q | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | A | I | Y | D | A | A | A | V | A | R | E | Y | G | K | T | I | I | A |
Template Known Secondary structure |   |
T | T | . |
| S |  |  |  |  |
| S | S |
|
| T | T | B |
|  |  |  |  | T |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
  |   |
295 | . | |
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | |
|
|
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|
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|
|
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|
|
|
|
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|
|
|
|
|
|
. | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |
  |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | L | V | C | D | E | E | D | A | R | N | A | I | N | A | G | V | V | A | L | S | T | T | N |
Query Conservation |   |
|
|
|
|   |   |   |
|
|
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |   |
|
|   |
|
|
|
|   |
|
|   |
|
|   |
|
|   |
Template Sequence |   |
D | G | G | I | K | Y | S | G | D | I | V | K | A | L | A | A | G | G | N | A | V | X | L | G | S |
Template Known Secondary structure |   |
 | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
343 | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
  |