Job Description P0ACL9 Confidence 96.77% Date Thu Jan 5 11:18:29 GMT 2012 Rank 40 Aligned Residues 93 % Identity 16% Template d2hr3a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	K	L	P	P	E	R	E	L	A	K	Q	F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q	S	F	S	D	P	L	V	E	L	L	S	D	H	P	E	S	Q	Y	D	L	L	E	T	R	H	A	L	E	G	I
Query Conservation
Alig confidence						.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	D	V	.	T	P	S	E	L	A	A	A	E	R	X	R	S	S	N	L	A	A	L	L	R	E	L	E	R	G	G	L	I	V	R	H	A	R	T	R	V	S	L	S	S	E	G	R	R	N	L	Y	G	N	R	A	K	R	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W
Template Known Secondary structure		T	S		B	.									T	T																T	T	S																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																			.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Y	Y	A	A	L	R	S	T	D	E	D	K	E	R	I	R	E	L	H	H	A	I	E	L	A	Q	Q	S	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	R	A	X	H	A	C	L	D	E	S	E	R	A	L	L	A	A	A	G	P	L	L	T	R	L	A	Q	F	E	E
Template Known Secondary structure																														T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions