Job Description P0ACL9 Confidence 96.63% Date Thu Jan 5 11:18:29 GMT 2012 Rank 45 Aligned Residues 95 % Identity 13% Template d1ylfa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.50

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	G	E	K	L	P	P	E	R	E	L	A	K	Q	F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q	S	F	S	D	P	L	V	E	L	L	S	D	H	P	E	S	Q	Y	D	L	L	E	T	R	H	A	L	E
Query Conservation
Alig confidence								.																																.	.
Template Conservation								.																																.	.
Template Sequence		N	P	S	S	L	C	.	T	S	D	Y	X	A	E	S	V	N	T	N	P	V	V	I	R	K	I	X	S	Y	L	K	Q	A	G	F	V	Y	V	.	.	N	G	G	A	G	L	L	K	D	L	H	E	I	T	L	L	D	V	Y	H	A	V	N	V	I	G	A	N	I	Q	A	V	L	E	I	I	L	I	Q	A
Template Known Secondary structure		S		G	G	G		.										T	S															T	T	S				.	.							S	S		G	G	G		B
Template Predicted Secondary structure								.																																.	.
Template SS confidence
		23	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	A	Y	Y	A	A	L	R	S	T	D	E	D	K	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	A	X	E	E	V	L	R	N	I	T	X	G	Q	L	F	E
Template Known Secondary structure											T		B
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions