Job Description P0ACL9 Confidence 42.98% Date Thu Jan 5 11:18:29 GMT 2012 Rank 404 Aligned Residues 79 % Identity 14% Template d1r7ja_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Archaeal DNA-binding protein Resolution 1.47

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	L	S	D	V	I	E	Q	Q	L	E	F	L	I	L	E	G	T	L	R	P	G	E	K	L	P	P	E	R	E	L	A	K	Q	F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q	S	F	S	D	P	L	V	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																																	.
Template Conservation																				.	.	.	.	.	.	.	.																																	.
Template Sequence		K	K	S	K	L	E	I	I	Q	A	I	L	E	A	C	K	S	G	.	.	.	.	.	.	.	.	S	P	K	T	R	I	M	Y	G	A	N	L	S	Y	A	L	T	G	R	Y	I	K	M	L	M	D	L	E	I	I	R	Q	.	E	G	K	Q	Y	M	L	T	K	K	G	E	E	L	L	E	D	I	R	K	F
Template Known Secondary structure																	T	T		.	.	.	.	.	.	.	.	B										T																T	T	S				.		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		89	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	D	H	P	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	M	R	K	N	M	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions