Job Description P0ACL9 Confidence 93.04% Date Thu Jan 5 11:18:29 GMT 2012 Rank 154 Aligned Residues 90 % Identity 12% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		36	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																								.	.
Query SS confidence											.	.	.	.																								.	.
Query Sequence		P	E	R	E	L	A	K	Q	F	.	.	.	.	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	.	.	Q	G	G	G	T	F	V	Q	S	S	L	W	Q	S	F	S	D	P	L	V	E	L	L	S	D	H	P	E	S	Q	Y	D	L	L	E	T	R	H	A	L	E	G
Query Conservation											.	.	.	.																								.	.
Alig confidence											.	.	.	.																								.	.																				.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	.	.	.	.	.	.	.	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	S	L
Template Known Secondary structure																																T	S							T	T							S	S										.	.	.	.	.	.	.									S	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	Y	Y	A	A	L	R	S	T	D	E	D	K	E	R	I	R	E	L	H	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N
Template Known Secondary structure									S															T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions