Job Description P0ACL9 Confidence 96.69% Date Thu Jan 5 11:18:29 GMT 2012 Rank 42 Aligned Residues 76 % Identity 16% Template c3lwfD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution Resolution 2.06 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

6

.

.

.

10

.

.

.

.

.

.

.

.

.

20

.

.

.

.

.

.

.

.

.

30

.

.

.

.

.

.

.

.

.

40

.

.

.

.

.

.

.

.

.

50

.

.

.

.

.

.

.

.

.

60

.

.

.

.

.

.

.

.

.

70

.

.

.

.

.

.

.

.

.

80

.

.

Predicted Secondary structure

.

Query SS confidence

.

Query Sequence

I

R

Q

P

K

L

S

D

V

I

E

Q

Q

L

E

F

L

I

L

E

G

T

L

R

P

G

E

K

L

P

P

E

R

E

L

A

K

Q

F

D

V

S

R

P

S

L

R

E

A

I

Q

R

L

E

A

K

G

L

L

L

R

R

Q

G

.

G

G

T

F

V

Q

S

S

L

W

Q

S

F

Query Conservation

.

Alig confidence

.

.

Template Conservation

.

Template Sequence

F

Q

G

X

K

I

T

T

K

G

R

Y

G

L

T

I

T

L

E

L

A

K

R

I

G

D

G

P

I

.

S

L

R

S

I

A

Q

D

K

N

L

S

E

H

Y

L

E

Q

L

I

G

P

L

R

N

A

G

I

V

K

S

I

R

G

A

H

G

G

Y

V

L

N

G

D

P

E

K

I

Template Known Secondary structure

S

S

T

T

T

S

B

.

T

T

T

S

S

T

T

S

T

T

T

Template Predicted Secondary structure

.

Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions