Job Description P0ACL9 Confidence 41.87% Date Thu Jan 5 11:18:29 GMT 2012 Rank 413 Aligned Residues 117 % Identity 15% Template c3l9fD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative uncharacterized protein smu.1604c; PDBTitle: the crystal structure of smu.1604c from streptococcus mutans ua159 Resolution 1.80 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																													.	.
Query SS confidence																									.	.	.	.	.	.	.	.																													.	.
Query Sequence		F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	.	.	.	.	.	.	.	.	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q	S	F	S	D	P	L	V	E	L	L	S	D	H	P	.	.	E	S	Q	Y	D	L	L	E	T	R	H	A	L	E	G	I	A	A	Y
Query Conservation																									.	.	.	.	.	.	.	.																													.	.
Alig confidence																									.	.	.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		Y	D	G	T	Y	G	M	I	Y	P	T	L	R	K	L	E	K	D	G	K	I	T	K	E	V	V	I	Q	D	G	R	P	N	K	N	I	Y	A	I	T	E	S	G	K	K	E	L	A	S	Y	L	Q	S	D	V	N	D	E	I	F	K	S	D	F	L	M	R	L	F	F	G	N	S	L	N	D	D	D	L	E
Template Known Secondary structure						S	S												T	T	S									T	T	S																						S																	T		T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	A	L	R	S	T	D	E	D	K	E	R	I	R	E	L	H	H	A	I	E	L	A	Q	Q	S	G	D	L	D	A	E	S	N	A	V	L	Q	Y	Q	I	A	V	T	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	I	R	E	E	I	E	R	K	E	E	K	I	K	R	L	S	E	N	L	E	I	W	K	K	K	G	E	L	T	P	T	Q	E	I	T	I	K	Y	G	L	A	Q	Y	K	S
Template Known Secondary structure																													T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions