Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACL9
Confidence95.93%DateThu Jan 5 11:18:29 GMT 2012
Rank65Aligned Residues89
% Identity11%Templatec3g3zA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator, marr family; PDBTitle: the structure of nmb1585, a marr family regulator from neisseria2 meningitidis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60......... 70.........80.........90.........100.........110..
Predicted Secondary structure 








...



Query SS confidence 

































. . .










































Query Sequence  PERELAKQFDVSRPSLREAIQRLEAKGLLLRRQG. . . GGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAA
Query Conservation 

 



  



  




  
   


    
... 
  
                                 
    
Alig confidence 

































...




















................





Template Conservation 
   

    
    

  
  
   


 
     
 
   
 

  
         ................      
Template Sequence  TQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTE. . . . . . . . . . . . . . . . SAQEFS
Template Known Secondary structure 
T

TTS


SS
GGGS

................
Template Predicted Secondary structure 
















................
Template SS confidence 















































































   45....50.........60.........70.........80.........90.........100.. ......
 
   113......120.........130.........140
Predicted Secondary structure 




Query SS confidence 



























Query Sequence  YYAALRSTDEDKERIRELHHAIELAQQS
Query Conservation                
             
Alig confidence 



























Template Conservation        
  

   
   
  
      
Template Sequence  DKVFATFGDKRTTRLFADLDALAEVXEK
Template Known Secondary structure 
Template Predicted Secondary structure 



Template SS confidence 



























   109110.........120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions