Job Description P0ACL9 Confidence 99.98% Date Thu Jan 5 11:18:29 GMT 2012 Rank 5 Aligned Residues 205 % Identity 19% Template c3fmsA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	V	I	E	Q	Q	L	E	F	L	I	L	E	G	T	L	R	P	G	E	K	L	P	P	E	R	E	L	A	K	Q	F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q	S	F	S	D	P	L	V	E	L	L
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		V	R	T	K	V	Y	N	L	L	K	E	X	I	L	N	H	E	L	K	L	G	E	K	L	N	.	V	R	E	L	S	E	K	L	G	I	S	F	T	P	V	R	D	A	L	L	Q	L	A	T	E	G	L	V	K	V	V	P	R	V	G	F	F	V	T	D	V	D	E	K	F	I	R	E	T	I	E	T	R	I
Template Known Secondary structure																T	T	S	S		T	T		B			.									T																	T	S					T	T	T
Template Predicted Secondary structure																											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	H	P	E	S	Q	Y	D	L	L	E	T	R	H	A	L	E	G	I	A	A	Y	Y	A	A	L	R	S	T	D	E	D	K	E	R	I	R	E	L	H	H	A	I	E	L	A	Q	Q	S	G	D	L	D	A	E	S	N	A	V	L	Q	Y	Q	I	A	V	T	E	A	A	H	N	V	V	L	L	H	L	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	E	V	F	C	L	E	N	Y	F	D	K	.	.	I	A	G	S	E	E	L	L	E	I	K	G	E	I	D	D	V	A	A	S	A	A	R	E	I	F	D	D	S	D	E	R	L	H	K	L	F	I	R	A	S	G	N	E	L	I	I	S	L	Y
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S				.	.			T																																					T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		88																.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	M	E	P	M	L	A	Q	N	V	R	Q	N	F	E	L	L	Y	S	R	R	E	M	L	P	L	V	S	S	H	R	T	R	I	F	E	A	I	M	A	G	K	P	E	E	A	R	E	A	S	H	R	H	L	A	F	I	E	E	I	L	L	D	R	S	R	E	E	S	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		E	K	I	W	D	R	I	D	L	V	R	H	.	.	.	.	.	.	.	.	L	N	E	R	Y	V	V	S	N	R	E	H	K	E	L	I	E	R	I	I	S	G	D	K	E	G	A	I	E	K	L	K	E	H	L	K	N	V	E	A	E	T	I	K	N	L	Y	T	Y	E	R
Template Known Secondary structure				T										.	.	.	.	.	.	.	.	T																				T	T																								G	G	G	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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