Job Description P0ACL9 Confidence 99.98% Date Thu Jan 5 11:18:29 GMT 2012 Rank 4 Aligned Residues 218 % Identity 21% Template c3c7jA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of transcriptional regulator (gntr family member)2 from pseudomonas syringae pv. tomato str. dc3000 Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Y	S	K	I	R	Q	P	K	L	S	D	V	I	E	Q	Q	L	E	F	L	I	L	E	G	T	L	R	P	G	E	K	L	P	P	E	R	E	L	A	K	Q	F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		L	G	N	E	Q	P	P	A	H	L	A	R	T	V	I	E	E	K	L	R	N	A	I	I	D	G	S	L	P	S	G	T	A	L	R	.	Q	Q	E	L	A	T	L	F	G	V	S	R	X	P	V	R	E	A	L	R	Q	L	E	A	Q	S	L	L	R	V	E	T	H	K	G	A	V	V	A	P	L	I	T	E
Template Known Secondary structure									G	G	G															T	S	S	S		T	T		B			.									T	S															T	T	S					T	T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	S	D	P	L	V	E	L	L	S	D	H	P	E	S	Q	Y	D	L	L	E	T	R	H	A	L	E	G	I	A	A	Y	Y	A	A	L	R	S	T	D	E	D	K	E	R	I	R	E	L	H	H	A	I	E	L	A	Q	Q	S	G	D	L	D	A	E	S	N	A	V	L	Q	Y	Q	I	A	V	T	E	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		D	A	V	D	A	Y	A	L	R	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	S	E	A	L	R	L	S	I	P	L	L	D	A	D	D	L	A	A	A	A	S	Y	I	E	Q	L	E	.	.	.	V	E	T	D	F	G	Q	I	G	R	L	N	R	X	F	H	L	S	L	Y	A	K
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										G	G	G																		.	.	.																				T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.																.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	N	V	V	L	L	H	L	L	R	C	M	E	P	M	L	A	Q	N	V	R	Q	N	F	E	L	L	Y	S	R	R	E	M	L	P	L	V	S	S	H	R	T	R	I	F	E	A	I	M	A	G	K	P	E	E	A	R	E	A	S	H	R	H	L	A	F	I	E	E	I	L	L	D	R	S	R	E	E	S
Query Conservation
Alig confidence																																					.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		T	H	N	K	R	L	X	R	L	V	E	E	G	L	N	E	E	E	R	F	L	R	F	N	L	S	S	X	G	L	G	K	L	S	Q	.	.	.	.	D	D	H	W	Q	L	L	R	L	A	E	Q	K	A	V	E	P	C	V	E	A	L	Q	Y	H	L	N	R	G	V	Q	A	V	T	Q	Y	L	Q	S	Q	K
Template Known Secondary structure																																	S				.	.	.	.												T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		241
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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