Job Description P0ACL9 Confidence 99.76% Date Thu Jan 5 11:18:29 GMT 2012 Rank 7 Aligned Residues 115 % Identity 18% Template c3by6C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:predicted transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Y	S	K	I	R	Q	P	K	L	S	D	V	I	E	Q	Q	L	E	F	L	I	L	E	G	T	L	R	P	G	E	K	L	P	P	E	R	E	L	A	K	Q	F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		M	A	I	T	.	.	Q	K	R	P	V	Y	L	Q	L	V	D	R	I	K	N	E	V	A	T	D	V	L	S	A	N	D	Q	L	P	S	V	R	E	T	A	L	Q	E	K	I	N	P	N	T	V	A	K	A	Y	K	E	L	E	A	Q	K	V	I	R	T	I	P	G	K	G	T	F	I	T	G	N	T	A	S
Template Known Secondary structure						.	.																			T	T	S	S		T	T		B												T																T	T	S					T	T	T						S
Template Predicted Secondary structure						.	.
Template SS confidence
		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	S	D	P	L	V	E	L	L	S	D	H	P	E	S	Q	Y	D	L	L	E	T	R	H	A	L	E	G	I	A	A	Y	Y	A	A	L	R	S	T	D	E	D	K	E	R	I	R	E	L	H
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	N	S	N	Q	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	D	L	S	Q	V	I	A	E	L	I	K	S	G	V	K	G	E	R	I	K	K	I	V	N	D	I
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.															.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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