Job Description P0ACL9 Confidence 86.09% Date Thu Jan 5 11:18:29 GMT 2012 Rank 209 Aligned Residues 96 % Identity 19% Template c2plyB_ PDB info PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	I	R	Q	P	K	L	S	D	V	I	E	Q	Q	L	E	F	L	I	L	E	G	T	L	R	P	G	E	K	L	P	P	E	R	E	L	A	K	Q	F	D	V	S	R	P	S	L	R	E	A	I	Q	R	L	E	A	K	G	L	L	L	R	R	Q	G	G	G	T	F	V	Q	S	S	L	W	Q	S	F	S
Query Conservation
Alig confidence																														.	.	.	.																																						.	.	.	.
Template Conservation																														.	.	.	.																																						.	.	.	.
Template Sequence		F	T	P	S	F	S	E	T	Q	K	K	L	L	K	D	L	E	D	K	Y	R	V	S	R	W	Q	P	P	.	.	.	.	W	V	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	N	D	E	F	Y	.	.	.	.	W	H	R	Q	A	L	G
Template Known Secondary structure																									T	T	S			.	.	.	.									T	T																	T	S				S	S	S	S			.	.	.	.
Template Predicted Secondary structure																														.	.	.	.																																						.	.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.					.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.					.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	L	V	E	L	L	S	D	H	P	E	S	Q	Y	D	L	L	E	T	R	H	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	R	E	V	I	K	N	L	A	S	T	G	P	F	G	L	A	E	A	R	D	A	L
Template Known Secondary structure												T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions